Transcript Information: S_Transcript_86447.p1


Annotated TAIR IDAT5G18100.1
Annotated Gene Namecopper/zinc superoxide dismutase 3
Annotated Gene Symbol(s)CSD3
Annotation TypeOrtholog
Chromosome Positionchr5:5987221-5988706 | Forward length=164
E-Value1.1E-86
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 148.47973473415
Replicate 256.070401486932
Replicate 360.026994514139
Condition 2: 8 Hour
Replicate 175.114272900475
Replicate 284.642535617819
Replicate 373.315654182738
Condition 3: 24 Hour
Replicate 168.734856333462
Replicate 264.382547535356
Replicate 358.637236992786


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_86447.p1 GENE.S_Transcript_86447~~S_Transcript_86447.p1 ORF type:complete len:157 (+),score=33.47,Sod_Cu|PF00080.16|3.4e-47 S_Transcript_86447:106-576(+)
ATGGGAATAGTTAAGGCTGTGGCTGTCATCACCGGCAACTCCAACGTCAAAGGTTCACTCCAATTCGTCCAAGATCCCAACGGGTTGACACATGTGAAAGGAAGGATAACAGGGCTAACACCAGGGCTTCATGGCTTTCATATTCATGCCCTTGGGGATACCACTAATGGGTGCAACTCCACTGGGCCTCATTTTAATCCATTGAAGAAGGATCATGGAGCTCCTTCTGACACAGAACGCCATGCAGGTGATCTGGGTAACGTTGTTGCTGGTCCTGATGGGGTTGCTGAGATTTCCATTAAAGACTCCCAGATACCACTAAGTGGGCAGCATTCGATACTCGGAAGAGCTGTTGTGGTGCATGCTGATCCAGATGATCTTGGAAGAGGTGGACATGAACTCAGCAAGATGACTGGTAATGCCGGTGCCAGAGTAGGATGTGGCATCATAGGGTTACAGTCATCTGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_86447.p1 GENE.S_Transcript_86447~~S_Transcript_86447.p1 ORF type:complete len:157 (+),score=33.47,Sod_Cu|PF00080.16|3.4e-47 S_Transcript_86447:106-576(+)
MGIVKAVAVITGNSNVKGSLQFVQDPNGLTHVKGRITGLTPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDTERHAGDLGNVVAGPDGVAEISIKDSQIPLSGQHSILGRAVVVHADPDDLGRGGHELSKMTGNAGARVGCGIIGLQSSV*

Click here to download the sequence:
Link to NCBI Protein BLAST