Transcript Information: S_Transcript_8646.p1


Annotated TAIR IDAT1G80130.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:30141250-30142478 | Reverse length=305
E-Value2E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3626535856726
Replicate 25.6550832439839
Replicate 34.1279770295424
Condition 2: 8 Hour
Replicate 10.69288271788519
Replicate 20.32305918613324
Replicate 30.15390503685907
Condition 3: 24 Hour
Replicate 15.5203676691032
Replicate 24.9091288613027
Replicate 38.2859423857963


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_8646.p1 GENE.S_Transcript_8646~~S_Transcript_8646.p1 ORF type:3prime_partial len:277 (+),score=64.15,TPR_17|PF13431.2|0.00019,TPR_17|PF13431.2|0.27,TPR_17|PF13431.2|0.5,TPR_19|PF14559.2|2.8e-05,TPR_19|PF14559.2|0.14,TPR_14|PF13428.2|1.3,TPR_14|PF13428.2|0.56,TPR_14|PF13428.2|0.062,TPR_16|PF13432.2|0.082,TPR_16|PF13432.2|3e-05,TPR_16|PF13432.2|0.063,TPR_11|PF13414.2|0.021,TPR_11|PF13414.2|0.0015,TPR_12|PF13424.2|8.4e-07 S_Transcript_8646:159-986(+)
ATGTTGTTAAGGAGTTCATCAACCCCAATCTTAAACTCATGGATGCCTCATCATCATCATACACCTTATCCTAGAGAATCATCTCCAGATAATAATAACAATCACAACAACAATAATAATAGTAATGACTTTTCTCTAAATCATCATGTCCTTCCTAGGAGTAAATCCAATATTACCACCACCCTTACAACTTCTTCTTCTACTTCTCCTTGTCACTCTCCCACCCACCAATCAAAACTTGCCACGCGTACGCTTTCCGACACCAACCTCCCTCCCCACACCGCCACCACCACGCGCCTCCAACGCCTCTTCTCAAGCTCCGGCCCTGCCGAGGAGGAGGTGAGAAAGAAGATGGAGTTGGCTGCGTTGGTTGAAGGCGGCGGCTGTGGCGGTGGTGGCAGAAGTGGTGGTTGTTGCGGTGGTGGTGGTGGGTCAGAGTTTCATGAGTATGGTAACAGTAGTAATGATCATGGGAGTGTTGAAGCTTATTATCAGAAAATGATCAAGGCTAATCCTGGAAATGCACTCTTGCTTGGTAATTATGCTAGGTTCTTGAAAGAGGAACGTGGAGATTTAGCTAAAGCAGAGGAATATTGTGGAAGATCAATTTTAAACAATCCAGGAGATGCAAATTTGCTATCCCTCTATGCTGATATCATTTGGCAAACCCAAAAGGATGCTGAGCGTGCTGAGAGCTACTTTGATCAGGCTGTTAAAACTGCTCCCGATGACTCGTATGTTTATGCATCATACGCAAAATTTCTATGGGATATGGAAGATGAGGAGGAACAAGAGGAAAGACAACATGACAAATTTGGAAACCCAAGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_8646.p1 GENE.S_Transcript_8646~~S_Transcript_8646.p1 ORF type:3prime_partial len:277 (+),score=64.15,TPR_17|PF13431.2|0.00019,TPR_17|PF13431.2|0.27,TPR_17|PF13431.2|0.5,TPR_19|PF14559.2|2.8e-05,TPR_19|PF14559.2|0.14,TPR_14|PF13428.2|1.3,TPR_14|PF13428.2|0.56,TPR_14|PF13428.2|0.062,TPR_16|PF13432.2|0.082,TPR_16|PF13432.2|3e-05,TPR_16|PF13432.2|0.063,TPR_11|PF13414.2|0.021,TPR_11|PF13414.2|0.0015,TPR_12|PF13424.2|8.4e-07 S_Transcript_8646:159-986(+)
MLLRSSSTPILNSWMPHHHHTPYPRESSPDNNNNHNNNNNSNDFSLNHHVLPRSKSNITTTLTTSSSTSPCHSPTHQSKLATRTLSDTNLPPHTATTTRLQRLFSSSGPAEEEVRKKMELAALVEGGGCGGGGRSGGCCGGGGGSEFHEYGNSSNDHGSVEAYYQKMIKANPGNALLLGNYARFLKEERGDLAKAEEYCGRSILNNPGDANLLSLYADIIWQTQKDAERAESYFDQAVKTAPDDSYVYASYAKFLWDMEDEEEQEERQHDKFGNPS

Click here to download the sequence:
Link to NCBI Protein BLAST