Transcript Information: S_Transcript_86468.p1


Annotated TAIR IDAT3G21000.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7363921-7365138 | Forward length=405
E-Value0.0004
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 129.118770831999
Replicate 225.142984203532
Replicate 321.975597865849
Condition 2: 8 Hour
Replicate 122.087011399888
Replicate 220.991767067795
Replicate 321.523469497238
Condition 3: 24 Hour
Replicate 132.696400289493
Replicate 228.550515881892
Replicate 327.514957532854


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_86468.p1 GENE.S_Transcript_86468~~S_Transcript_86468.p1 ORF type:complete len:308 (+),score=60.59,UBN2_2|PF14227.2|1.8e-19,UBN2|PF14223.2|1.5e-11 S_Transcript_86468:82-924(+)
ATGGGAGAAAAGTTCAAGGATGAGGATAAAGCTTTGATGTTGTTGGCTTCCTTGCCGAAGAAAAGGTACAATGTGGTGATTACAAACTTAGTAGTGGGTAAGTCAACTCTCACTATGCATGAAACTGTGACAGCTTTGCTAGATAATGAAAAGTTGATGACGACCTTCTCCTCAAGTGGTTCAAAAAGTGATGATAAAAGACATGTAGAGCATAAGAGAGGAAGAAGTAAGTCAAGAGGACTGCGTAACAACTCAAGAGATAAGAGTTCCAACTTTAGAGGGATGAAAGATTATAGTAAGTGTGTTTGTTATTACTGTGATGAAAAAGGGCACATTAGGTATACATGTGAAAAGTTTAAACGAGATATGCAAGAGGTGGTGGCTCAAAAAAGAAAGGGTGTCAAGGAAATGGGAGTGGTAGCTCTTGGTTTTGGTAGTGATACCAAAGATCATAAGCTAATGTGGAAGTCATGGGTTCTTGGCTTTGGTTGTTCCCATCATGCTGCAGTAAAGAAAGAAATGTTTAGCACATATGAAGGAGTAGAAAATGTGGAGGTAATATTGGCCAGCGGTGCAAAAGAAAAGGTAGAAGGAGTTGGTAGTGTTCAGTTGAAGGTCCACGATGGCCGAGTGAGGACTCTCGTCAATGTGATGCATATACCTACAATGATGACAAATTTTATAAGTTTGAGTATTCTTGATGCTCGTGGTTACTCTATTAATGGCGGAGATGGGGTATTGAAAGTCATCAAAGATAAATTGACTGTTTTGAAAGGATATATGAACAAGAATAACTTGTATGTGTTGGATGGAAGCACTTACAAGCCAATGATAAAGCAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_86468.p1 GENE.S_Transcript_86468~~S_Transcript_86468.p1 ORF type:complete len:308 (+),score=60.59,UBN2_2|PF14227.2|1.8e-19,UBN2|PF14223.2|1.5e-11 S_Transcript_86468:82-924(+)
MGEKFKDEDKALMLLASLPKKRYNVVITNLVVGKSTLTMHETVTALLDNEKLMTTFSSSGSKSDDKRHVEHKRGRSKSRGLRNNSRDKSSNFRGMKDYSKCVCYYCDEKGHIRYTCEKFKRDMQEVVAQKRKGVKEMGVVALGFGSDTKDHKLMWKSWVLGFGCSHHAAVKKEMFSTYEGVENVEVILASGAKEKVEGVGSVQLKVHDGRVRTLVNVMHIPTMMTNFISLSILDARGYSINGGDGVLKVIKDKLTVLKGYMNKNNLYVLDGSTYKPMIKQ*

Click here to download the sequence:
Link to NCBI Protein BLAST