Transcript Information: S_Transcript_86590.p1


Annotated TAIR IDAT5G08450.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Histone deacetylation protein Rxt3 (InterPro:IPR013951); Has 34444 Blast hits to 20801 proteins in 1175 species: Archae - 64; Bacteria - 2390; Metazoa - 15568; Fungi - 3729; Plants - 1886; Viruses - 208; Other Eukaryotes - 10599 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2727970-2732572 | Reverse length=918
E-Value8.1e-313
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.922147049279
Replicate 223.297446880685
Replicate 324.881988219845
Condition 2: 8 Hour
Replicate 126.358389978354
Replicate 226.508735492815
Replicate 325.153737441401
Condition 3: 24 Hour
Replicate 124.661863600087
Replicate 221.809093621522
Replicate 321.724096640903


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_86590.p1 GENE.S_Transcript_86590~~S_Transcript_86590.p1 ORF type:complete len:822 (+),score=213.22,Rxt3|PF08642.6|6.9e+03,Rxt3|PF08642.6|3e-11,Rxt3|PF08642.6|0.094 S_Transcript_86590:268-2733(+)
ATGACTGCTGCTCCAAAGCGAGGGTCTCATGAAGAAGGCGTTCATTCATCGTCTTCCTTGATGCGCCCTGCCAATTTTGGGAGCGAGGAGGAGGAATCTCAACCTCAGCCTCAACCTCAACCTCAGTCCCAATCTCAATCACAATCTCCTCTTTTTGGGAGGATAACTTATCCGCCCCCGGTTCAGCATTCTATGCCGGGGCTGCTCCCCCGCCCTGAGTCTCGTGACGGGGAGAGGAGATCCCCTTTACATTCCTTGTATAGAATGCCCTCAGCAATGAGTGATTCCTCTCATGCTGGTGCTGCTCACCCCCCTGTGGTGGGTCCTGAGATTAGGGCGGAACTGAGGGAGTCGAAGGAAAGTAGGGAGGTTAATAAGGGTGTTGATAGTAGTAGTAGAGATGTGAAGATGGAGTCGAGAGAGGTACATCATCATGTTGGGAAGTCGGAGAAGGATGTAAGAGTTGAGAGCCGGGGAGATGAGAGTAAAGAGACGAAGCATGATAGAGAGGGGCGTAATGATCAGAAAAGTGAAGTGAAGGTGGAAAAGGATGTTCATGGAGTTGGAGGGAGTCACTCTAATTGGAAGGACCATCATAGAGTGAAAAGACATCCAGATGTTCCTACTGGAAGTCCTGGAATTATGGGAGCTTGGAGTGGTTCTCAAGTGCGTGCTAAATATGAAGCTCCCAAGGAAGTTGGCGTAGGTAATGTTATTAGGGATCATGTGGAAGGAAGTGAGGCTGTTGGAGAGAATAAAGTTGATCCAAAAGGTGACGACAAGTACAAGGATAAGGATAGGAAAAGGAAAGAAGGAAAGCATCATGATTGGCCTGAAAGCGATAAAGATAGGAATGATAGCAGGAATAGTGTGCTAGTTGGTTGTAGTAATAATGATCACAAGGATGCAACAAGAGACGAAAGAGAACCGGAGCGGTGGGAGCGGGAGAGGAAAGATATTTCAAAAGAGAAGGAACGAGTAAAAGAAAGGGAAAATCTTGTTGACAGAGATGGTCAGAATGGTGGTGAGAAAGTCAGTTACCATAATGAGAAAGATGCAGCAGATAAAACACCCGTACAGGAATGTTTTCCAGCAGAACAGAAGAAGCCAAAGGAACATGAGTCTTGGAGAAATGTAGAGAGAGAAGCTAAAGAGAGGAGGAAAGAGAGAGAAGGTGATGTGGAGGGAGAGAGACCTGAGAAGCGCAGTAGAGGCTATGACAAAGAGTCAGACGAAGGAGGTGCTGAGGTTGATGGGGGTACAGACAGAGAAAGAGATGCCTTCAGTTATGGAGTTCAGCAGCGGAAGAGAATGCTTCGCCCAAGAGGCAGCCCACAAGTTGGTAATTGTGATGCGCGCTTCAAGTCTCATTGCCAGGAAGCAGAAGGGTCTCAAGGTAAACCTGAGGTGTCGACTGTTTATAAAGTTGGTGAATGCATGCAAGAATTGACAAAGCTGTGGAAGGAATATGAATTATCTCATCCTGATAAAAGCACCGACAGCTTATATAATGGCCCTACACTGGAAATTCGGATTCCAGCTGAGCATGTTACTGCTACAAATCGTCAAGTTAGGGGTGGGCAGCTTTGGGGAACAGATATATATACTGATGATTCAGATCTTGTTGCTGTTCTCATGCATACAGGTTATTGTCGCCCAACGGCATCTCCTCCTCCTGCAGCTATCCAGGAGCTGCGTGCAACAATACGGGTTCTACCCCCACAAGATAGTTACGTGTCTACTTTGAGAAACAACGTTCGGTCGCGTGCTTGGGGAGCTGCAATCGGTTGTAGTTACCGTGTTGAGCGTTGCTGCATTATGAAGAAAGGAGGTGGAACTATTGATCTTGAGCCTTGTCTCACACATACATCAACGATTGAGCCTACTTTGGCTCCACTTGCTGTTGAACGTACAATGACTACTAGAGCAGCGGCATCGAATGCTTTGCGGCAACAAAGATTTGTGCGAGAAGTCACAATACAATATAACCTTTGCAATGAGCCTTGGGTCAAATATAGTATAAGCATTGTTGCTGACAAGGGTTTGAAGAAGCCCTTGTATACTTCTGCTCGTTTGAAGAAGGGGGAAGTTTTGTACCTAGAGACTCATACATGCAGGTATGAGCTCTGCTTTACCGGTGAGAAGAACATCAAAGCTGCCTCTGCATTGCAGGGGCATGAAGCAGAAACAGACAAGTCCCAGAACCACCAGAACCATTCTGTGAATGGTGAGCGAAGTATGGCAGAAGGCGATAGTGTTGTGGTCGACATGTTCCGTTGGTCAAGGTGCAAGAAGCCACTTCCACAGAAGGTCATGCGATCAATTGGTATTCCTTTGCCCTTGGATCATGTGGAGGTCTTGGAGGAGAATATTGATTGGGAAGATGTGCAGTGGTCACAAACTGGTGTCTGGATTGCCGGAAAAGAGTACCAGCTTGCAAGGGTGCATTTCTTGTCTCCAAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_86590.p1 GENE.S_Transcript_86590~~S_Transcript_86590.p1 ORF type:complete len:822 (+),score=213.22,Rxt3|PF08642.6|6.9e+03,Rxt3|PF08642.6|3e-11,Rxt3|PF08642.6|0.094 S_Transcript_86590:268-2733(+)
MTAAPKRGSHEEGVHSSSSLMRPANFGSEEEESQPQPQPQPQSQSQSQSPLFGRITYPPPVQHSMPGLLPRPESRDGERRSPLHSLYRMPSAMSDSSHAGAAHPPVVGPEIRAELRESKESREVNKGVDSSSRDVKMESREVHHHVGKSEKDVRVESRGDESKETKHDREGRNDQKSEVKVEKDVHGVGGSHSNWKDHHRVKRHPDVPTGSPGIMGAWSGSQVRAKYEAPKEVGVGNVIRDHVEGSEAVGENKVDPKGDDKYKDKDRKRKEGKHHDWPESDKDRNDSRNSVLVGCSNNDHKDATRDEREPERWERERKDISKEKERVKERENLVDRDGQNGGEKVSYHNEKDAADKTPVQECFPAEQKKPKEHESWRNVEREAKERRKEREGDVEGERPEKRSRGYDKESDEGGAEVDGGTDRERDAFSYGVQQRKRMLRPRGSPQVGNCDARFKSHCQEAEGSQGKPEVSTVYKVGECMQELTKLWKEYELSHPDKSTDSLYNGPTLEIRIPAEHVTATNRQVRGGQLWGTDIYTDDSDLVAVLMHTGYCRPTASPPPAAIQELRATIRVLPPQDSYVSTLRNNVRSRAWGAAIGCSYRVERCCIMKKGGGTIDLEPCLTHTSTIEPTLAPLAVERTMTTRAAASNALRQQRFVREVTIQYNLCNEPWVKYSISIVADKGLKKPLYTSARLKKGEVLYLETHTCRYELCFTGEKNIKAASALQGHEAETDKSQNHQNHSVNGERSMAEGDSVVVDMFRWSRCKKPLPQKVMRSIGIPLPLDHVEVLEENIDWEDVQWSQTGVWIAGKEYQLARVHFLSPN*

Click here to download the sequence:
Link to NCBI Protein BLAST