Transcript Information: S_Transcript_86595.p1


Annotated TAIR IDAT1G06710.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:2056999-2060242 | Reverse length=997
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.4113942264837
Replicate 24.3166327395138
Replicate 33.9842323876257
Condition 2: 8 Hour
Replicate 15.2444234339688
Replicate 23.9211528186477
Replicate 34.8655739098327
Condition 3: 24 Hour
Replicate 15.8767485477414
Replicate 24.7729494488232
Replicate 35.1746313928975


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_86595.p1 GENE.S_Transcript_86595~~S_Transcript_86595.p1 ORF type:complete len:736 (+),score=115.00,PPR_2|PF13041.2|11,PPR_2|PF13041.2|8.3e-12,PPR_2|PF13041.2|4.1e-07,PPR_2|PF13041.2|3e-10,PPR_2|PF13041.2|37,PPR_2|PF13041.2|4.9e-07,PPR_2|PF13041.2|1.3e-14,PPR_2|PF13041.2|3.2e-18,PPR_2|PF13041.2|2.4e-18,PPR_2|PF13041.2|9.4e-10,PPR_2|PF13041.2|5.3e-15,PPR_2|PF13041.2|3e-14,PPR_2|PF13041.2|2e-10,PPR_2|PF13041.2|1.1e-17,PPR_2|PF13041.2|1.2e-18,PPR_2|PF13041.2|0.013,PPR_2|PF13041.2|0.13,PPR_2|PF13041.2|1.4e-05,PPR_2|PF13041.2|51,PPR_1|PF12854.3|0.68,PPR_1|PF12854.3|3.6e-08,PPR_1|PF12854.3|92,PPR_1|PF12854.3|2.4e-08,PPR_1|PF12854.3|0.27,PPR_1|PF12854.3|0.68,PPR_1|PF12854.3|6e-05,PPR_1|PF12854.3|6.3e-12,PPR_1|PF12854.3|5.2e-09,PPR_1|PF12854.3|1.6e-12,PPR_1|PF12854.3|4.4e-09,PPR_1|PF12854.3|6.8e-13,PPR_1|PF12854.3|4e-05,PPR_1|PF12854.3|1.1e-08,PPR_1|PF12854.3|4e-12,PPR_1|PF12854.3|1.4e-08,PPR_1|PF12854.3|5e-06,PPR_1|PF12854.3|2.8e-05,PPR_1|PF12854.3|2.3e+03,PPR|PF01535.16|0.35,PPR|PF01535.16|2.4e-07,PPR|PF01535.16|1.9,PPR|PF01535.16|5.1e-07,PPR|PF01535.16|26,PPR|PF01535.16|0.013,PPR|PF01535.16|0.0072,PPR|PF01535.16|3.7e-08,PPR|PF01535.16|1.2e-06,PPR|PF01535.16|5e-08,PPR|PF01535.16|2.4e-05,PPR|PF01535.16|1.7e-07,PPR|PF01535.16|0.013,PPR|PF01535.16|7.4e-06,PPR|PF01535.16|6.7e-10,PPR|PF01535.16|0.00011,PPR|PF01535.16|0.00063,PPR|PF01535.16|0.00052,PPR|PF01535.16|57,PPR_3|PF13812.2|79,PPR_3|PF13812.2|0.015,PPR_3|PF13812.2|27,PPR_3|PF13812.2|0.084,PPR_3|PF13812.2|31,PPR_3|PF13812.2|3.4,PPR_3|PF13812.2|0.025,PPR_3|PF13812.2|4.9e-05,PPR_3|PF13812.2|4.3e-05,PPR_3|PF13812.2|1.8e-06,PPR_3|PF13812.2|0.00034,PPR_3|PF13812.2|0.0033,PPR_3|PF13812.2|0.012,PPR_3|PF13812.2|0.074,PPR_3|PF13812.2|1.2e-06,PPR_3|PF13812.2|0.01,PPR_3|PF13812.2|70,PPR_3|PF13812.2|0.088,PPR_3|PF13812.2|2.1e+03,ATP13|PF12921.3|45,ATP13|PF12921.3|0.97,ATP13|PF12921.3|3.1e+03,ATP13|PF12921.3|1.6e+03,ATP13|PF12921.3|2.7e+03,ATP13|PF12921.3|6.5e+02,ATP13|PF12921.3|3.5e+02,ATP13|PF12921.3|2e+02,ATP13|PF12921.3|87,MRP-S27|PF10037.5|1.1e+02,MRP-S27|PF10037.5|1.4e+02,MRP-S27|PF10037.5|0.02,MRP-S27|PF10037.5|3.3,MRP-S27|PF10037.5|7e+02,AEP1|PF17049.1|1.9,AEP1|PF17049.1|7.3e+02,AEP1|PF17049.1|0.35,AEP1|PF17049.1|26,AEP1|PF17049.1|1e+03,TPR_19|PF14559.2|3.8e+03,TPR_19|PF14559.2|7e+03,TPR_19|PF14559.2|4.3e+03,TPR_19|PF14559.2|3.2e+02,TPR_19|PF14559.2|3.9,TPR_19|PF14559.2|5e+03,TPR_19|PF14559.2|1.6e+02,TPR_19|PF14559.2|15,TPR_19|PF14559.2|1e+03,TPR_19|PF14559.2|1.6e+04,ANAPC3|PF12895.3|0.49,ANAPC3|PF12895.3|3.5e+02,ANAPC3|PF12895.3|5,ANAPC3|PF12895.3|36,ANAPC3|PF12895.3|2.5e+03,ANAPC3|PF12895.3|1.6e+03,ANAPC3|PF12895.3|2.1e+03,ANAPC3|PF12895.3|1.6e+04,TPR_11|PF13414.2|3.4e+02,TPR_11|PF13414.2|1.6e+04,TPR_11|PF13414.2|53,TPR_11|PF13414.2|3.3,TPR_11|PF13414.2|3.4e+02,TPR_11|PF13414.2|3.6e+03,TPR_11|PF13414.2|2.6e+02,TPR_11|PF13414.2|5e+03,TPR_11|PF13414.2|8.2e+03 S_Transcript_86595:914-3121(+)
ATGTCTAGTGCTGGGTTTAGAATGCATATCTCTAATTTGAGTAGTTTTGCATATGCCCTTTGTAAGGATGGACGTTGGAGGGAAGCCCTTGAATTGATAGAGAAGGAAGAGTTTGTCTTGGATACTAAACTTTATACAACAATGATATCTGGTTTATGCAAGGCTTCACTTTTTGATGAAGCCATGGATTTGTTGAACAAAATGAGATGTAGTTCTTCATTGCCTAATGTTGTGACATACAGGGTTTTTCTTTGTGGATGTCTGAACAAAAGACAGCTTGGCAGGTGTAAGAGGATACTAGGCATGATGATGGAGGAAGGCTGTTACCCTAGTCGTAAAATATTTAATTCACTTGTCCATGGATATTGTAGATCAGGGGATTTTAGTTATGCTTATCAATTGCTTAAGAAAATGGTAGATTGTGGATGCGAACCTGGTTATCTGGTTTATAATATACTAATAGGTGGAATCTGTAGTAAGGAGTTACCCAGTTCAGCTGAATTAGAATTGGCGGAGAAAGTATACAGTGAAATGCTTAACCTGGGATTGGTATTAAACAAGGTCAATGTCGGAAACTTCTCTAGATGCCTTTGTGAGGCTGGAAAGTTTGACAAGGCATATAATATTATTCACGAAATGATGAATAAGGGTTTCATACCTGACTGCTCTACATACTCCAAGGTAATCGAATTCCTGTGCAATGGGTCACAGATGCAGAAGGCTTTTCTGCTATTTGAAGAGATGAAGAGAAGTAGTGTTGCTCCAGACGTATATGTGTATACTATTCTGATTGATGGTTTCTGTAAGGCTGGTCTTGTTGCTCAAGCACGTAAGTGGTTTGATGAAATGGTCAGGAATAACTGTTCTCCTAATGTGGTGACTTACACTGCATTAATTCATGCATACCTTAAACTGCACAGGATAGATGATGCAAAGAAGCTTTTTGAGATGATGTTGTTGGATGGCTGCATACCAAATGTCGTGACATATACTGCTCTGATCGATGGTTACTGCAAATCTGGGGACACTGAAAAGGCTTGCCAAGTTTATGCTAGGATGATAGGTCAAAAAGACTTACCAGATGTAAATATGTATTTTAAGGTAAATTCTTCTAAGTTGTCTGTACCAAATGTTTATACTTATGGAGCCCTTGTTGATGGGTTGTGCAAAGCACATAAGGTAAGAGATGCCCATGACTTACTTGACTCAATGATCGCTGATGGGTGCGAGCCTAATCACATTGTGTACGATGCCCTGATTGATGGATTTTGCAAGGAAGGGGAACTAGATAAAGCACAAGAAGTATTTAGTAAAATGTCTGAAAGTGGATATAGTCCAAATGAGTACACCTATGGCTCTTTGATTGATAGGATGTTTAAAGATAAACGACTTGATCTTGCTTTAAAGGTCTTAACGAGAATGCTAGAAAGTTCTTGTGCTCCTAATGTTGTAATTTACACATTGATGATTGATGGGATGTGTAAAGCTCAAAAGACAGATGAGGCTTATAAGCTTATGTTGATGATGGATGAAAAGGGTTGTCGTCCCAATGTTGTGACTTATACAGCTATGATTGATGGTTTTGGGAAAGCTGGTAACCTTGACGAATGTCTTAAGTTGTTCACACAGATGCAGACGAAGGGTTGTGCTCCAAATTATATAACCTACAGGGTTTTAATAAATCATTGTTGTACTTTTGGCCTTTTAGAAAAGGCTTATGACCTTTTGGAGGAAATGAAACTCACATATTGGCCTATGCATGTAGCAAACTATCAGAAGGTTATTGAAGGTTTTAACCAAGAGTTTATTGCATCTCTTGGGCTTCTAGATGTCTTAAATGACAATAAGCTTGTACCTATTGCTCCAGTGTACAAAGTTCTGGTTGATAGCCTTTGTAAGGCTGGAAGACTTGAAATAGCCGTTGAATTGTGTAAAGAGATGGCATCATTTGCCTCCTTTCCTATGGTGACAAACTTGTATTCTTCTTTGATTAAGAGTCTCTGTCTTGTATCCAAGGTTGACGTGGCTTTTGAATTGTTTGCTGAAATGACAAGAAATGGAGGAGTGCCAGAACCAAGCATCTTTTCTCACCTCATCTTAGGGCTTATCAGAGTTAACCACTGGGAAGAAGCTCTTCAACTTTCACATAGCACATGCCTCATGGGTGTAAATTTCCTCTCTTTTGAGGAGATGGCTCAAAGGAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_86595.p1 GENE.S_Transcript_86595~~S_Transcript_86595.p1 ORF type:complete len:736 (+),score=115.00,PPR_2|PF13041.2|11,PPR_2|PF13041.2|8.3e-12,PPR_2|PF13041.2|4.1e-07,PPR_2|PF13041.2|3e-10,PPR_2|PF13041.2|37,PPR_2|PF13041.2|4.9e-07,PPR_2|PF13041.2|1.3e-14,PPR_2|PF13041.2|3.2e-18,PPR_2|PF13041.2|2.4e-18,PPR_2|PF13041.2|9.4e-10,PPR_2|PF13041.2|5.3e-15,PPR_2|PF13041.2|3e-14,PPR_2|PF13041.2|2e-10,PPR_2|PF13041.2|1.1e-17,PPR_2|PF13041.2|1.2e-18,PPR_2|PF13041.2|0.013,PPR_2|PF13041.2|0.13,PPR_2|PF13041.2|1.4e-05,PPR_2|PF13041.2|51,PPR_1|PF12854.3|0.68,PPR_1|PF12854.3|3.6e-08,PPR_1|PF12854.3|92,PPR_1|PF12854.3|2.4e-08,PPR_1|PF12854.3|0.27,PPR_1|PF12854.3|0.68,PPR_1|PF12854.3|6e-05,PPR_1|PF12854.3|6.3e-12,PPR_1|PF12854.3|5.2e-09,PPR_1|PF12854.3|1.6e-12,PPR_1|PF12854.3|4.4e-09,PPR_1|PF12854.3|6.8e-13,PPR_1|PF12854.3|4e-05,PPR_1|PF12854.3|1.1e-08,PPR_1|PF12854.3|4e-12,PPR_1|PF12854.3|1.4e-08,PPR_1|PF12854.3|5e-06,PPR_1|PF12854.3|2.8e-05,PPR_1|PF12854.3|2.3e+03,PPR|PF01535.16|0.35,PPR|PF01535.16|2.4e-07,PPR|PF01535.16|1.9,PPR|PF01535.16|5.1e-07,PPR|PF01535.16|26,PPR|PF01535.16|0.013,PPR|PF01535.16|0.0072,PPR|PF01535.16|3.7e-08,PPR|PF01535.16|1.2e-06,PPR|PF01535.16|5e-08,PPR|PF01535.16|2.4e-05,PPR|PF01535.16|1.7e-07,PPR|PF01535.16|0.013,PPR|PF01535.16|7.4e-06,PPR|PF01535.16|6.7e-10,PPR|PF01535.16|0.00011,PPR|PF01535.16|0.00063,PPR|PF01535.16|0.00052,PPR|PF01535.16|57,PPR_3|PF13812.2|79,PPR_3|PF13812.2|0.015,PPR_3|PF13812.2|27,PPR_3|PF13812.2|0.084,PPR_3|PF13812.2|31,PPR_3|PF13812.2|3.4,PPR_3|PF13812.2|0.025,PPR_3|PF13812.2|4.9e-05,PPR_3|PF13812.2|4.3e-05,PPR_3|PF13812.2|1.8e-06,PPR_3|PF13812.2|0.00034,PPR_3|PF13812.2|0.0033,PPR_3|PF13812.2|0.012,PPR_3|PF13812.2|0.074,PPR_3|PF13812.2|1.2e-06,PPR_3|PF13812.2|0.01,PPR_3|PF13812.2|70,PPR_3|PF13812.2|0.088,PPR_3|PF13812.2|2.1e+03,ATP13|PF12921.3|45,ATP13|PF12921.3|0.97,ATP13|PF12921.3|3.1e+03,ATP13|PF12921.3|1.6e+03,ATP13|PF12921.3|2.7e+03,ATP13|PF12921.3|6.5e+02,ATP13|PF12921.3|3.5e+02,ATP13|PF12921.3|2e+02,ATP13|PF12921.3|87,MRP-S27|PF10037.5|1.1e+02,MRP-S27|PF10037.5|1.4e+02,MRP-S27|PF10037.5|0.02,MRP-S27|PF10037.5|3.3,MRP-S27|PF10037.5|7e+02,AEP1|PF17049.1|1.9,AEP1|PF17049.1|7.3e+02,AEP1|PF17049.1|0.35,AEP1|PF17049.1|26,AEP1|PF17049.1|1e+03,TPR_19|PF14559.2|3.8e+03,TPR_19|PF14559.2|7e+03,TPR_19|PF14559.2|4.3e+03,TPR_19|PF14559.2|3.2e+02,TPR_19|PF14559.2|3.9,TPR_19|PF14559.2|5e+03,TPR_19|PF14559.2|1.6e+02,TPR_19|PF14559.2|15,TPR_19|PF14559.2|1e+03,TPR_19|PF14559.2|1.6e+04,ANAPC3|PF12895.3|0.49,ANAPC3|PF12895.3|3.5e+02,ANAPC3|PF12895.3|5,ANAPC3|PF12895.3|36,ANAPC3|PF12895.3|2.5e+03,ANAPC3|PF12895.3|1.6e+03,ANAPC3|PF12895.3|2.1e+03,ANAPC3|PF12895.3|1.6e+04,TPR_11|PF13414.2|3.4e+02,TPR_11|PF13414.2|1.6e+04,TPR_11|PF13414.2|53,TPR_11|PF13414.2|3.3,TPR_11|PF13414.2|3.4e+02,TPR_11|PF13414.2|3.6e+03,TPR_11|PF13414.2|2.6e+02,TPR_11|PF13414.2|5e+03,TPR_11|PF13414.2|8.2e+03 S_Transcript_86595:914-3121(+)
MSSAGFRMHISNLSSFAYALCKDGRWREALELIEKEEFVLDTKLYTTMISGLCKASLFDEAMDLLNKMRCSSSLPNVVTYRVFLCGCLNKRQLGRCKRILGMMMEEGCYPSRKIFNSLVHGYCRSGDFSYAYQLLKKMVDCGCEPGYLVYNILIGGICSKELPSSAELELAEKVYSEMLNLGLVLNKVNVGNFSRCLCEAGKFDKAYNIIHEMMNKGFIPDCSTYSKVIEFLCNGSQMQKAFLLFEEMKRSSVAPDVYVYTILIDGFCKAGLVAQARKWFDEMVRNNCSPNVVTYTALIHAYLKLHRIDDAKKLFEMMLLDGCIPNVVTYTALIDGYCKSGDTEKACQVYARMIGQKDLPDVNMYFKVNSSKLSVPNVYTYGALVDGLCKAHKVRDAHDLLDSMIADGCEPNHIVYDALIDGFCKEGELDKAQEVFSKMSESGYSPNEYTYGSLIDRMFKDKRLDLALKVLTRMLESSCAPNVVIYTLMIDGMCKAQKTDEAYKLMLMMDEKGCRPNVVTYTAMIDGFGKAGNLDECLKLFTQMQTKGCAPNYITYRVLINHCCTFGLLEKAYDLLEEMKLTYWPMHVANYQKVIEGFNQEFIASLGLLDVLNDNKLVPIAPVYKVLVDSLCKAGRLEIAVELCKEMASFASFPMVTNLYSSLIKSLCLVSKVDVAFELFAEMTRNGGVPEPSIFSHLILGLIRVNHWEEALQLSHSTCLMGVNFLSFEEMAQRK*

Click here to download the sequence:
Link to NCBI Protein BLAST