Transcript Information: S_Transcript_86623.p1


Annotated TAIR IDAT5G35700.1
Annotated Gene Namefimbrin-like protein 2
Annotated Gene Symbol(s)FIM2, FIM5
Annotation TypeOrtholog
Chromosome Positionchr5:13872833-13876432 | Reverse length=687
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.5254921787887
Replicate 26.550399853856
Replicate 36.1566593129893
Condition 2: 8 Hour
Replicate 17.9379591726994
Replicate 27.798753735562
Replicate 39.3827512352798
Condition 3: 24 Hour
Replicate 16.517971144904
Replicate 27.4988091478609
Replicate 38.1589774368101


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_86623.p1 GENE.S_Transcript_86623~~S_Transcript_86623.p1 ORF type:complete len:677 (+),score=157.62,CH|PF00307.27|5.4e-16,CH|PF00307.27|8.1e-20,CH|PF00307.27|1.6e-16,CH|PF00307.27|2.5e-13,CAMSAP_CH|PF11971.4|0.76,CAMSAP_CH|PF11971.4|4,CAMSAP_CH|PF11971.4|0.29,CAMSAP_CH|PF11971.4|2.6,CH_2|PF06294.7|3.8e+02,CH_2|PF06294.7|8.1,CH_2|PF06294.7|0.17,CH_2|PF06294.7|3.2 S_Transcript_86623:228-2258(+)
ATGTCTAGCTTTGTGGGTGTCATTGTTTCTGATCAATCCTTACAAAGTCAATTCACTCAAGTCGAACTTCGTAGCCTCAAGTCTAAGTACAACACATTAAAGGCTCAATCTCCATCTGGTCATGTAATTGTTTCGGCTTTGCCGCCTGTTTTTGCAAAACTAAAGGGTATTACTGGATTATATACTGAAGATGAGGTAAGAGGTGCATTGGAGGATACATACCCTGATGTGACTCATGAGATTGATTTTGAATCTTTCCTAAGGGAATATCTTAATTTCCAAGGCCGAGCCAGTGGAAAGGGTGCAGGTTACAAACGTACTTCTTCAATCCTCAGACAATCGACCACCACCCATTTTCATGTCATTAATGAATCAGAGAAGGCCTCTTTTGTTGCACACATCAACAATTATCTGGCTGAAGATCCTTTCTTGAAGAACTATCTACCCATAGATCCAAAAACAAACCAGCTATTTGACCTTGCCAAAGATGGAGTGCTTATCTGTAAACTGATTAATGTTGCTGTGCCGGGAACAATAGATGAAAGAGCTATTAACACCAAAAAGACCCTTAACCCTTGGGAAAGAAATGAGAATCATACACTTTGTCTCAATTCTGCTAAGGCTATTGGTTGTACTGTGGTCAATATTGGGGCACAGGACTTAGTGGAGGGGCGAACTCATCTGGTTATGGGATTGATTTCTCAAATTATCAAGATTCAATTGTTAGCTGACCTCAATTTGAAGAAAACACCTCAACTGGTGGAGTTGGTTGATGAAAATCAGGAGGTGGAGGAGCTCATGAGTTTGCCTCCAGAAAAGGTCTTGTTGAAATGGATGAATTTCCAACTGAAGAAATCAGGGTATAAAAAGGAGGTCACAAATTTCTCTACTGATTTGAAGGATGGTGAAGCTTATGCTCATTTACTAAATGTGCTTGCACCAGAATACAGCTCTACTGCTACTTTGGAAACCAAGGATCCCAATGAAAGAGCAAATTTGATTCTGGAGCAAGCAGAGAAATTGGATTGCAAGAGATATATCAGTCCAAAGGACATAGTAGAAGGATCAACAAATTTAAATTTGACTTTTGTTGCACAGATATTTCAGCACAGAAATGGTCTGACTGTTGATAATGAGAAGATATCCCTAGCAGAGACTGCATTAGATGACGACACTCAAACTTCTAGAGAGGAGAGATGCTTCCGGCTCTGGATTAACAGTCTTGGAGTTGCTACATATGTCAATAATTTGTTTGAGGATGTTAGAACAGGATGGGTTCTTTTGGAAGTGCTTGATAAAGTTTTACCCGGATCAGTTAACTGGAAGCTGGCCAGTAAACCTCCTATCAAGATGCCCTTCAAGAAAGTGGAAAATTGCAATCAAGTCATTAATATTGGAAAAGACTTGAATTTCTCCCTTGTGAATATTGCCGGAAATGACATTGTACAAGGAAACAAGAAGCTCATTCTAGCGTTTCTCTGGCAGCTGATGAGATTTACAATGCTGCAACTCCTGAAAAATTTGAGATCTTTCTCACAAGGAAGGGAGATTACTGATGCAGATATTCTCAATTGGGCAAATCAAAAGGTTAAGAGTTCAGGCAAATCTTCTCAAATGGATAGCTTCAAGGATAAAAACCTCTCCAGTGGAATATTCTTTCTTGAACTTCTTAGTGCTGTGGAGCCAAGAGTGGTTAACTGGAAACTTGTCACCAAAGGGGAAGAGGAGGAGGACAAGAAGTTGAATGCAACTTACATCATCAGTGTTGCGAGAAAGCTTGGATGTTCTATATTCTTGTTGCCTGAGGATATCATAGAGGTTAACCAGAAGATGATCCTTACCTTAACAGCAAGCATTATGTACTGGAGTCTTCAGAATAAATCAGGGCAGCTACCCATTGTTGAAGAAAGTACTTCAGAAGCATCACCGTCAGCAGAAGCCGACAGTGACGCACTGGCTGAAGAAGTCTCCAATTTATCGGTCGATGAGGCTGGCTCAGATAACATTCAATCACCACAAGCTGAGGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_86623.p1 GENE.S_Transcript_86623~~S_Transcript_86623.p1 ORF type:complete len:677 (+),score=157.62,CH|PF00307.27|5.4e-16,CH|PF00307.27|8.1e-20,CH|PF00307.27|1.6e-16,CH|PF00307.27|2.5e-13,CAMSAP_CH|PF11971.4|0.76,CAMSAP_CH|PF11971.4|4,CAMSAP_CH|PF11971.4|0.29,CAMSAP_CH|PF11971.4|2.6,CH_2|PF06294.7|3.8e+02,CH_2|PF06294.7|8.1,CH_2|PF06294.7|0.17,CH_2|PF06294.7|3.2 S_Transcript_86623:228-2258(+)
MSSFVGVIVSDQSLQSQFTQVELRSLKSKYNTLKAQSPSGHVIVSALPPVFAKLKGITGLYTEDEVRGALEDTYPDVTHEIDFESFLREYLNFQGRASGKGAGYKRTSSILRQSTTTHFHVINESEKASFVAHINNYLAEDPFLKNYLPIDPKTNQLFDLAKDGVLICKLINVAVPGTIDERAINTKKTLNPWERNENHTLCLNSAKAIGCTVVNIGAQDLVEGRTHLVMGLISQIIKIQLLADLNLKKTPQLVELVDENQEVEELMSLPPEKVLLKWMNFQLKKSGYKKEVTNFSTDLKDGEAYAHLLNVLAPEYSSTATLETKDPNERANLILEQAEKLDCKRYISPKDIVEGSTNLNLTFVAQIFQHRNGLTVDNEKISLAETALDDDTQTSREERCFRLWINSLGVATYVNNLFEDVRTGWVLLEVLDKVLPGSVNWKLASKPPIKMPFKKVENCNQVINIGKDLNFSLVNIAGNDIVQGNKKLILAFLWQLMRFTMLQLLKNLRSFSQGREITDADILNWANQKVKSSGKSSQMDSFKDKNLSSGIFFLELLSAVEPRVVNWKLVTKGEEEEDKKLNATYIISVARKLGCSIFLLPEDIIEVNQKMILTLTASIMYWSLQNKSGQLPIVEESTSEASPSAEADSDALAEEVSNLSVDEAGSDNIQSPQAEE*

Click here to download the sequence:
Link to NCBI Protein BLAST