Transcript Information: S_Transcript_8664.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value1E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.19689026807778
Replicate 20
Replicate 30.045481469996549
Condition 2: 8 Hour
Replicate 10.078885537547964
Replicate 20.082756530109963
Replicate 30.052566825166415
Condition 3: 24 Hour
Replicate 10.080807213898622
Replicate 20.055891027315283
Replicate 30.12439972579589


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_8664.p1 GENE.S_Transcript_8664~~S_Transcript_8664.p1 ORF type:complete len:811 (-),score=115.27,RVT_1|PF00078.23|9.8e-23,zf-RVT|PF13966.2|6.5e+03,zf-RVT|PF13966.2|6.5e-22,zf-RVT|PF13966.2|1.7e+03,RVT_3|PF13456.2|2.7e-19 S_Transcript_8664:1343-3775(-)
ATGCGCAACAAAAGAAGTGGAGCAGGATACATGGCCATCAAGATTGATTTGGCAAAGGCTTATGACCGGTTACGTTGGGATTTTATCCGTGACACTCTCATGGAAATGTGCATCCCCCTGCCTCTCCTTGAAGTGATCATGCATTGTGTCACTACTCCTCAAATGAGTATTCTCTGGAATGGTGCCCCCTCCAAGCATTTCACCCCCACACGGGGTGTTAGACAAGGAGACCCGCTCTCCCCCTACTTGTTTGTCATGTGCATGGAAAGATTGCATCACCTCATTGAAGATTCAATCAGTTGTGGATTATGGAAACCCATCCAATGCAGCAAAGGGGGTCCATGGCTATCCAATTTATTCTTTGCTGACGACATTGTGCTTTTTGCAGAGGCTACTCCTGAACAAGCTTTATTAATCAAACATTGTCTTGACAGATTTTGCAGGGCTTCTGGGGAATTAGTCTCTTACCCAAAATCAAGAGTTCACTTCTCTAAGAACGTCAGTTCTGAAGCTGCCTTTACTATCAGCAATATTCTGGATATACAATCCACTCAAGATCTTGGGTTCTACCTAGGAGTTCCGACTATAAATGGTAGAGTCACTAAGACTACTTTTGCCTACGTGATGGACAAATTGGAAGCTCGCTTGAATGGCTGGAAATCAAGATGTCTTTCACTTGCTGGGCGTACGACCCTGACTAAGGCGGTGTTGTCCTCAATGGCAACATATGCCGTGCAATCTTCCCACTTACCACGCTCTATATGTGATGACATCGACAGGAAAACTCGCAAATTCCTCTGGGGCAGTGTAGGGGAGCAAAAGAAAATCCATTTAGTGTCTTGGGACACTATTCAGAAGCCCAGGAAAGCAGGTGGCCTTGGCATCAAATCTATGCGTCAGGTTAACGCGGGGTTCATGGCCAAACTTGGTTGGCGTATATTGACAGAACCGAACTCCTTATGGGCACAGGTTCTAAGAGAAAAATATTGTCAGGGAAGGAAAGATCTTGATATGTTTCTTCAGAAGTCGAATGCGTCGAACACTTGGAGAGGTATTACTGCCAATGTTGAACTCATACGCAAGGGAGCAAGAGTGGCTGTTGGCAATGGGCAGAAGACTTTGTTTTGGGATCATAGATGGGCCCTTCATACTCCTCTTTCAGCCTTCACCTTACGAGAAGTACCCTTGATAGATCAAGACCGGACAGTTGAAGAGTATTGGGACCCGAAGGGATATTGGAAATGGGATGATATCGCAAATTACTTACCTCAAGAGGTCTTACGTCATCTTCTTCCATTCTCTCTTGTCCTAGAGGAGGATGATGCTTTCTTTTGGGAAGGAACCTCGGATGGGAAGTTCTCATTGAAGACAGCCATGCAATTACAACGACAAGAATCTGAGACAACAAATAACAAGACTTGGGATGTCATTTGGAAAGTTCCAGTTTCACAGACGGTGAGAATGTTCCTGTGGCTGCTCATGCATGACCGTTTGTTGACTAATGCAAACCGTGTTGCAAGGGGTCTGTCTGATGACCCGAGGTGTGCAAGCTGTGGTGCAAATGAAGAATCAATCGATCACTTATTCAGACGTTGTCCCCATGCTCGCTCTATATGGACAAATGCAAGTGTTTTCTCCATTCCTCCATGCTTTTGGACTCTGCCCATAAATATGTGGTTAATGGATAATCTGGATATTCACAATGTTAAGCTACAAGAAGATGCACCCATGCGATTTGCCATTACTCTCTGGTGGCTATGGCGGTGGCGCAACAATCGAACGTTTGGAAGAAGAAATGAAATGCCACAAGACACATCAAGGTTTCTTAATGCTAGATTCCTAGAGACTAAGAAAGCCATGGGCTTTGATGAACTCTTTCATGGAACTACTTCACCAAAGCGGCATGAAGTCCTCATAAACTGGACGTCCCCCCCTGATGGATGGGTTTCTTTGAATTCAGATGGTGCCAGCAAAGGCAACCCAGGACCAGCAGGGGGAGGGGGCTTACTCAGAAACTCCAGGGGAGAATGTATAGCAGCTTATTCTGAGAACTATGGGTACTGCACTGTGTCTATGGCGGAGGCCTTGGCTGTCCTAAAAGGCTTGCAAGTGGCGAGAGCTAAGGGCATCACAAAGCTGTGGGTTTGCTTGGACTCCAAAGCTATTATGCAAGGCATAAGAGATGGTAGCATGAGTTCTGGACCTGTTCAACATATTCTCAAGAGATGTCGTCATTTGATTCGTTCTGCTGATTGGTTAGTGGAGGTAAAGCATTGTTATAGGGAAGCTAACCGAGGAGCTGATTGGTTAGCTAACACTGGAGTGATGCAAGCCTCAAAATCGATTGAATTGGAAAGCCTTCCCCAAGAGCTGAAAACAATCCTTCTGGAGGACATCAGGGGTACTGCTATTCCAAGAAGAATTCCTCTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_8664.p1 GENE.S_Transcript_8664~~S_Transcript_8664.p1 ORF type:complete len:811 (-),score=115.27,RVT_1|PF00078.23|9.8e-23,zf-RVT|PF13966.2|6.5e+03,zf-RVT|PF13966.2|6.5e-22,zf-RVT|PF13966.2|1.7e+03,RVT_3|PF13456.2|2.7e-19 S_Transcript_8664:1343-3775(-)
MRNKRSGAGYMAIKIDLAKAYDRLRWDFIRDTLMEMCIPLPLLEVIMHCVTTPQMSILWNGAPSKHFTPTRGVRQGDPLSPYLFVMCMERLHHLIEDSISCGLWKPIQCSKGGPWLSNLFFADDIVLFAEATPEQALLIKHCLDRFCRASGELVSYPKSRVHFSKNVSSEAAFTISNILDIQSTQDLGFYLGVPTINGRVTKTTFAYVMDKLEARLNGWKSRCLSLAGRTTLTKAVLSSMATYAVQSSHLPRSICDDIDRKTRKFLWGSVGEQKKIHLVSWDTIQKPRKAGGLGIKSMRQVNAGFMAKLGWRILTEPNSLWAQVLREKYCQGRKDLDMFLQKSNASNTWRGITANVELIRKGARVAVGNGQKTLFWDHRWALHTPLSAFTLREVPLIDQDRTVEEYWDPKGYWKWDDIANYLPQEVLRHLLPFSLVLEEDDAFFWEGTSDGKFSLKTAMQLQRQESETTNNKTWDVIWKVPVSQTVRMFLWLLMHDRLLTNANRVARGLSDDPRCASCGANEESIDHLFRRCPHARSIWTNASVFSIPPCFWTLPINMWLMDNLDIHNVKLQEDAPMRFAITLWWLWRWRNNRTFGRRNEMPQDTSRFLNARFLETKKAMGFDELFHGTTSPKRHEVLINWTSPPDGWVSLNSDGASKGNPGPAGGGGLLRNSRGECIAAYSENYGYCTVSMAEALAVLKGLQVARAKGITKLWVCLDSKAIMQGIRDGSMSSGPVQHILKRCRHLIRSADWLVEVKHCYREANRGADWLANTGVMQASKSIELESLPQELKTILLEDIRGTAIPRRIPL*

Click here to download the sequence:
Link to NCBI Protein BLAST