Transcript Information: S_Transcript_86664.p2


Annotated TAIR IDAT1G54380.1
Annotated Gene Namespliceosome protein-related
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:20298287-20300899 | Reverse length=515
E-Value7E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6728172204971
Replicate 21.7650231646012
Replicate 31.475418886688
Condition 2: 8 Hour
Replicate 12.8027655845375
Replicate 22.3011044315147
Replicate 33.0451210864259
Condition 3: 24 Hour
Replicate 11.2482790566054
Replicate 22.5901498944397
Replicate 31.0088817762046


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_86664.p2 GENE.S_Transcript_86664~~S_Transcript_86664.p2 ORF type:complete len:175 (+),score=29.48,SIP1|PF04938.8|1.1e-47 S_Transcript_86664:2004-2528(+)
ATGCCAAAGATTCCTGATATCGAGAAGTGCCCTCCACATCTTCTCCCACTGAAGCAGTGGGAAGATGAGTTTGTTGCAGATTTTAAAGAGTTGCGAATGGCATTACAGAGCCTAGACGATACCAGTGACACAGAGCCTGAAGACTCGCAAACAATTATTTTCAATCACTCAGCGCGTGCAAGCCGTTGTTCTAAGAGTTCGTTGTTACTTGAGTTACCATCAGGTGGTCCAACGTTAGCCTCAGTGCTGGAAATGGATCCAGTGACTCGGGTTACAATGCTCAAAAGACGCGTAAGCTTGTTTGACAGTGCAAACGATTTTTCGAAGGATGACTGTGCCTGGCTCTTTACTCTTTGTGCTGTAATTGACATTCCCTTGGATGCTGACACTTCTGCATCTCTGCGTTGTCTACTTCGGAAGTGTGCCAAGTTACGTGCTGGAAAATCTGAAGTCGATGATGAGGTTGTAATGCTGAATATTCTGGCAACAATCTCAGGGAAAGTATTTGGGCAGTCAGAAGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_86664.p2 GENE.S_Transcript_86664~~S_Transcript_86664.p2 ORF type:complete len:175 (+),score=29.48,SIP1|PF04938.8|1.1e-47 S_Transcript_86664:2004-2528(+)
MPKIPDIEKCPPHLLPLKQWEDEFVADFKELRMALQSLDDTSDTEPEDSQTIIFNHSARASRCSKSSLLLELPSGGPTLASVLEMDPVTRVTMLKRRVSLFDSANDFSKDDCAWLFTLCAVIDIPLDADTSASLRCLLRKCAKLRAGKSEVDDEVVMLNILATISGKVFGQSEA*

Click here to download the sequence:
Link to NCBI Protein BLAST