Transcript Information: S_Transcript_86665.p1


Annotated TAIR IDAT1G54380.1
Annotated Gene Namespliceosome protein-related
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:20298287-20300899 | Reverse length=515
E-Value1E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2831268452676
Replicate 21.891096247787
Replicate 30.75746951771931
Condition 2: 8 Hour
Replicate 12.5133495730907
Replicate 23.5954756742418
Replicate 32.7786729913636
Condition 3: 24 Hour
Replicate 11.404313938681
Replicate 20.32376873680496
Replicate 31.0359053952101


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_86665.p1 GENE.S_Transcript_86665~~S_Transcript_86665.p1 ORF type:3prime_partial len:560 (+),score=161.57,SIP1|PF04938.8|6.1e-41 S_Transcript_86665:136-1812(+)
ATGACAGAAGAGTTTCCTGGTGATAGTGATACCTCTTCCCTTTCCCTGAAGCCAACAATCACCATTTCTAACAACATGAACAACAACAACCAGCAACCTGCCTCAGTTGTTGATGAAATCCCAGAAGACCAATTCTTGAGTTGCTCCCCCAAGAAGCCCAACTTGGAGCAAGAAATTCCCCCTCAAACTGTTAATGTTACTGTAACTGATGAACTGGGTACTCAACTTCTTGGAGGTAACTCTGAACCCCTTCAAGTTTCTGATTCAATTTTCACTACTCATGATACTAAAGCTGAGTTTCTTGCAACTGGGGCTGAGTCTAATGAGAACCCCATTTCAGAGAATCAATTTTTTGGGTTTGATTCTGAGGAAAAGATTGAAAATTTTGAGTACCCATCTGTTGGTTATGATGTGAATAAGGGAAATGATGAAACTCCCCTCGAGGGTTTAAATCTTGGTGGTAACCATCAGTTTGTTAGGATTAATTCAGAGAAAAAGATTGAGGATTTTGAGTACCCATCTGAGAATAAGGGAACTGATGTGAATAAGGAGAATGATGAAACTTCCCTCAAGGGTTTGAATCTTGGTGGTATTACTGATAATTTGAATGAGAATTTTGGTGGGTTCTTGGGAAAATTGGTGAAGAATGATGGAATTACTGATAATGTGAATAATGGTGATGTTTTAACCACCTGTTCACTGAAGATTGAGGTGATTGATGGAACAGCTGTTGTTGATGTTTTCAACAATAATAATGGCAAGAAAAATAAAAGGAGGGGTAAAAAGGGCAATCATATTACTAACGGTAAGGCTTCAAATGGTGGGAAAAGTAAGTTTATGTACTCAAGGAAAGATATGGAAGCTTTGAGGTTTGTGAATGTTAAAGGGCAGAAGAAGTTCTGGCAAAAGATATACTCTGGGTTTGAACAAACTGTTAAGAAAGAGTATGATGAGCTGGGTAGTTTTAATAAGCATCATCACAAGCATGGGGAGAATCGGCACCAAGCTCGTCACGTGAGGAACAACTTCCACGGCCAAGGAATTCTGGGAGAATCGTCTTCAGAAAATGTGAGTTGTGATGCTGAAATTAGTGGTTCCGCAGATTTTGTCTCTGATGGTGAGAACAGTGCCAAGCATGGTGATGCTTTAGTGGGTGAGTTGAGTGAATATGAAGAGAGTGATGATGAAGACGAGAACATCCAAAGACCTGCTTTTTTGGTTGAAGGTGAACCAGATTTTGAATCTGGACCCCCAGAGGATGGTCTAGAATACCTTAGGCGTGTCAGGTGGGAAGCTAGGCAGATACCAAAGGTGAAAGTGGCCAAGATTGATAATAGTAAACTCAACAAGGAGCAGAGTGTTTACATGCCAAAGATTCCTGATATCGAGAAGTGCCCTCCACATCTTCTCCCACTGAAGCAGTGGGAAGATGAGTTTGTTGCAGATTTTAAAGAGTTGCGAATGGCATTACAGAGCCTAGACGATACCAGTGACACAGAGCCTGAAGACTCGCAAACAATTATTTTCAATCACTCAGCGCGTGCAAGCCGTTGTTCTAAGAGTTCGTTGTTACTTGAGTTACCATCAGGTGGTCCAACGTTAGCCTCAGTGCTGGAAATGGATCCAGTGACTCGGGTTACAATGCTCAAAAGACGCGTAAGCTTGTTTGACAGTGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_86665.p1 GENE.S_Transcript_86665~~S_Transcript_86665.p1 ORF type:3prime_partial len:560 (+),score=161.57,SIP1|PF04938.8|6.1e-41 S_Transcript_86665:136-1812(+)
MTEEFPGDSDTSSLSLKPTITISNNMNNNNQQPASVVDEIPEDQFLSCSPKKPNLEQEIPPQTVNVTVTDELGTQLLGGNSEPLQVSDSIFTTHDTKAEFLATGAESNENPISENQFFGFDSEEKIENFEYPSVGYDVNKGNDETPLEGLNLGGNHQFVRINSEKKIEDFEYPSENKGTDVNKENDETSLKGLNLGGITDNLNENFGGFLGKLVKNDGITDNVNNGDVLTTCSLKIEVIDGTAVVDVFNNNNGKKNKRRGKKGNHITNGKASNGGKSKFMYSRKDMEALRFVNVKGQKKFWQKIYSGFEQTVKKEYDELGSFNKHHHKHGENRHQARHVRNNFHGQGILGESSSENVSCDAEISGSADFVSDGENSAKHGDALVGELSEYEESDDEDENIQRPAFLVEGEPDFESGPPEDGLEYLRRVRWEARQIPKVKVAKIDNSKLNKEQSVYMPKIPDIEKCPPHLLPLKQWEDEFVADFKELRMALQSLDDTSDTEPEDSQTIIFNHSARASRCSKSSLLLELPSGGPTLASVLEMDPVTRVTMLKRRVSLFDSA

Click here to download the sequence:
Link to NCBI Protein BLAST