Transcript Information: S_Transcript_86668.p1


Annotated TAIR IDAT1G54380.1
Annotated Gene Namespliceosome protein-related
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:20298287-20300899 | Reverse length=515
E-Value4.2E-59
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.78603801116567
Replicate 20.74473551248995
Replicate 32.2567061030566
Condition 2: 8 Hour
Replicate 11.8895915470877
Replicate 22.3598996455408
Replicate 31.1692237082901
Condition 3: 24 Hour
Replicate 10.92172504179722
Replicate 20.86065107251952
Replicate 30.53211064145815


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_86668.p1 GENE.S_Transcript_86668~~S_Transcript_86668.p1 ORF type:internal len:237 (+),score=60.96,SIP1|PF04938.8|7.6e-55 S_Transcript_86668:2-709(+)
GAATCGTCTTCAGAAAATGTGAGTTGTGATGCTGAAATTAGTGGTTCCGCAGATTTTGTCTCTGATGGTGAGAACAGTGCCAAGCATGGTGATGCTTTAGTGGGTGAGTTGAGTGAATATGAAGAGAGTGATGATGAAGACGAGAACATCCAAAGACCTGCTTTTTTGGTTGAAGGTGAACCAGATTTTGAATCTGGACCCCCAGAGGATGGTCTAGAATACCTTAGGCGTGTCAGGTGGGAAGCTAGGCAGATACCAAAGGTGAAAGTGGCCAAGATTGATAATAGTAAACTCAACAAGGAGCAGAGTGTTTACATGCCAAAGATTCCTGATATCGAGAAGTGCCCTCCACATCTTCTCCCACTGAAGCAGTGGGAAGATGAGTTTGTTGCAGATTTTAAAGAGTTGCGAATGGCATTACAGAGCCTAGACGATACCAGTGACACAGAGCCTGAAGACTCGCAAACAATTATTTTCAATCACTCAGCGCGTGCAAGCCGTTGTTCTAAGAGTTCGTTGTTACTTGAGTTACCATCAGGTGGTCCAACGTTAGCCTCAGTGCTGGAAATGGATCCAGTGACTCGGGTTACAATGCTCAAAAGACGCGTAAGCTTGTTTGACAGTGCAAGTGATTTTTCGAAGGATGACTGTGCTTGGCTCTTTGCTCTTTGTGCTGTAATTGACATGCCCTTGGATGCTGACACTTCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_86668.p1 GENE.S_Transcript_86668~~S_Transcript_86668.p1 ORF type:internal len:237 (+),score=60.96,SIP1|PF04938.8|7.6e-55 S_Transcript_86668:2-709(+)
ESSSENVSCDAEISGSADFVSDGENSAKHGDALVGELSEYEESDDEDENIQRPAFLVEGEPDFESGPPEDGLEYLRRVRWEARQIPKVKVAKIDNSKLNKEQSVYMPKIPDIEKCPPHLLPLKQWEDEFVADFKELRMALQSLDDTSDTEPEDSQTIIFNHSARASRCSKSSLLLELPSGGPTLASVLEMDPVTRVTMLKRRVSLFDSASDFSKDDCAWLFALCAVIDMPLDADTS

Click here to download the sequence:
Link to NCBI Protein BLAST