Transcript Information: S_Transcript_86677.p1


Annotated TAIR IDAT1G18660.4
Annotated Gene Namezinc finger (C3HC4-type RING finger) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:6421433-6425489 | Forward length=491
E-Value2E-91
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.366245718928
Replicate 232.311815912247
Replicate 324.459515231442
Condition 2: 8 Hour
Replicate 15.8985122153772
Replicate 27.5366156765036
Replicate 35.2911678452081
Condition 3: 24 Hour
Replicate 132.457468732479
Replicate 238.657068681642
Replicate 327.905240618426


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_86677.p1 GENE.S_Transcript_86677~~S_Transcript_86677.p1 ORF type:complete len:282 (+),score=44.34,zf-C3HC4_3|PF13920.2|3.9e-09,zf-C3HC4|PF00097.21|1.8e-08,zf-C3HC4_2|PF13923.2|2.6e-08,zf-RING_2|PF13639.2|1.4e-07,zf-RING_5|PF14634.2|3.8e-07,TPR_11|PF13414.2|3.7e-06,TPR_11|PF13414.2|4.5e+02,zf-C3HC4_4|PF15227.2|8.5e-07 S_Transcript_86677:232-1077(+)
ATGTCCGGCGATGAGAATTCGTTGATCGGCGACTTCTTCGACGGCATCGACGATGTTGAAGAGTTCCTCTGTGCGAATGAGGGAGGGGTTTCCATGTCAATTGATAGATTCCGTCAGGTTTTCGAGTTTGTACAGTCCGGTAATCAAGCCTTTCGTGCTTCTCGTTTTGAAGAGGCAATTAATTGTTACTCAACAGCAAATGTCATGAAACCAGGCGATCCTATCATTCTGAGCAATAGATGTGCTGCATATATAAGGTTGAGCCAATTTTTGAAAAGCAGGCCATCTACTGCTTCTGAAAGCAGTCCGTTATATGGGCTGGATCCTACAATTCATGCCGAGCTGGAAAGATATAAGCTGGCGCGTGATGTTGCTTTGTCTGGCCTTCAGCTTGATCCTCTCAGCAATCATCTGCAGGCCCTTCTTCGGATTTTGGAGAAAATACTTACTGGTTCGATGGGGGCCAAAAGCCGTGTGAAACCAGAACGTAATGATGATTTTGATTGTACCCTTTGCCTGAAGCTGCTATATGAGCCAATAACAACCCCCTGTGGGCATTCTTTTTGTCGTTCATGTCTATTTCAGTCAATGGATCAAAGTAATAAATGTCCCCTTTGCCGAACTGTGTTATTTATTACTCCAAGGACATGTGCTATCAGTGTGACACTGAACAACATTATACAGAAAAACTTCCCAGAGGAACATGCTGAGAGGAAATCAGAGAATGATAGTTTGACAAAGCTTGGGGTTGATTTGGTGCCTGTTTTTGTCATGGATGCTGTCCTCCCTTGTGAGAAAATGATGCTAAATATATTTGAACCTCGTTACAGACTTATGGTGAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_86677.p1 GENE.S_Transcript_86677~~S_Transcript_86677.p1 ORF type:complete len:282 (+),score=44.34,zf-C3HC4_3|PF13920.2|3.9e-09,zf-C3HC4|PF00097.21|1.8e-08,zf-C3HC4_2|PF13923.2|2.6e-08,zf-RING_2|PF13639.2|1.4e-07,zf-RING_5|PF14634.2|3.8e-07,TPR_11|PF13414.2|3.7e-06,TPR_11|PF13414.2|4.5e+02,zf-C3HC4_4|PF15227.2|8.5e-07 S_Transcript_86677:232-1077(+)
MSGDENSLIGDFFDGIDDVEEFLCANEGGVSMSIDRFRQVFEFVQSGNQAFRASRFEEAINCYSTANVMKPGDPIILSNRCAAYIRLSQFLKSRPSTASESSPLYGLDPTIHAELERYKLARDVALSGLQLDPLSNHLQALLRILEKILTGSMGAKSRVKPERNDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDQSNKCPLCRTVLFITPRTCAISVTLNNIIQKNFPEEHAERKSENDSLTKLGVDLVPVFVMDAVLPCEKMMLNIFEPRYRLMVS*

Click here to download the sequence:
Link to NCBI Protein BLAST