Transcript Information: S_Transcript_86697.p1


Annotated TAIR IDAT5G24270.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)SOS3, CBL4, ATSOS3
Annotation TypeOrtholog
Chromosome Positionchr5:8238781-8240179 | Reverse length=222
E-Value8.9E-108
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.363113899639
Replicate 229.727796258248
Replicate 323.378116162311
Condition 2: 8 Hour
Replicate 120.224079080098
Replicate 218.380626816677
Replicate 317.212797127027
Condition 3: 24 Hour
Replicate 129.844418289967
Replicate 223.834243160102
Replicate 327.235071423365


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_86697.p1 GENE.S_Transcript_86697~~S_Transcript_86697.p1 ORF type:5prime_partial len:213 (+),score=36.67,EF-hand_1|PF00036.28|40,EF-hand_1|PF00036.28|0.00025,EF-hand_1|PF00036.28|9.8e-05,EF-hand_1|PF00036.28|9.1e-07,EF-hand_6|PF13405.2|8.5,EF-hand_6|PF13405.2|0.0094,EF-hand_6|PF13405.2|0.0023,EF-hand_6|PF13405.2|0.035,EF-hand_7|PF13499.2|0.022,EF-hand_7|PF13499.2|7.9e-11,EF-hand_5|PF13202.2|4.7e+02,EF-hand_5|PF13202.2|0.33,EF-hand_5|PF13202.2|0.68,EF-hand_5|PF13202.2|1.3e-07,EF-hand_8|PF13833.2|7.2e+03,EF-hand_8|PF13833.2|0.022,EF-hand_8|PF13833.2|9.8e-07 S_Transcript_86697:2-640(+)
GGCTACGAGGATCCTACCATTCTCGCCTCAGAAACACCTTTCACGGAGAGTGAAGTGGAGGCATTACATGAACTTTACAAGAAATTGAGCTGCTCCATAATTGATGATGGGCTTATTCATAAGGAAGAATTCCAACTTGCACTCTTTAGGAACAGTAAAAGAAAGAATCTCTTTGCAGATAGGATCTTTGACTTATTTGATGTCAAGCGCAACGGGGTTGTTGATTATGGAGAGTTTGTTCGGTCATTGGGGGTGTTCCATCCAAATGCAAATGTGGAAGACAAGATCAACTTTGCATTTAGATTGTATGATCTGAGACAAACCGGGTATATTGAACGAGAAGAGTTGAAGGAAATGGTTCTGGCATTGTTGCACGAATCAGATCTGATACTCTCAGATGATGTCGTTGAGACAATAGTGGATAAGACATTTAGAGACGCAGATTTAAAAGGTGATGGAAAGATCGATCAAGAAGAATGGAAGGAATTGGTAAAGAAGCACCCGACATTGATAAAGAATATGACGTTGCCATATTTAAAGGATATCACACTAGCATTTCCAAGCTTTGTTCTATCCTCCGAAGTTGAAGACATAGAAGTGGAACTAGAAAGTTGTGACACAAGTACAACCCTAGGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_86697.p1 GENE.S_Transcript_86697~~S_Transcript_86697.p1 ORF type:5prime_partial len:213 (+),score=36.67,EF-hand_1|PF00036.28|40,EF-hand_1|PF00036.28|0.00025,EF-hand_1|PF00036.28|9.8e-05,EF-hand_1|PF00036.28|9.1e-07,EF-hand_6|PF13405.2|8.5,EF-hand_6|PF13405.2|0.0094,EF-hand_6|PF13405.2|0.0023,EF-hand_6|PF13405.2|0.035,EF-hand_7|PF13499.2|0.022,EF-hand_7|PF13499.2|7.9e-11,EF-hand_5|PF13202.2|4.7e+02,EF-hand_5|PF13202.2|0.33,EF-hand_5|PF13202.2|0.68,EF-hand_5|PF13202.2|1.3e-07,EF-hand_8|PF13833.2|7.2e+03,EF-hand_8|PF13833.2|0.022,EF-hand_8|PF13833.2|9.8e-07 S_Transcript_86697:2-640(+)
GYEDPTILASETPFTESEVEALHELYKKLSCSIIDDGLIHKEEFQLALFRNSKRKNLFADRIFDLFDVKRNGVVDYGEFVRSLGVFHPNANVEDKINFAFRLYDLRQTGYIEREELKEMVLALLHESDLILSDDVVETIVDKTFRDADLKGDGKIDQEEWKELVKKHPTLIKNMTLPYLKDITLAFPSFVLSSEVEDIEVELESCDTSTTLG*

Click here to download the sequence:
Link to NCBI Protein BLAST