Transcript Information: S_Transcript_86710.p1


Annotated TAIR IDAT5G61460.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)MIM, ATRAD18, SMC6B
Annotation TypeOrtholog
Chromosome Positionchr5:24714551-24721841 | Reverse length=1057
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.9078632241679
Replicate 27.6904580743337
Replicate 38.5012231090121
Condition 2: 8 Hour
Replicate 111.29230192031
Replicate 212.293863490593
Replicate 313.215825515088
Condition 3: 24 Hour
Replicate 17.572892943406
Replicate 27.3171734517922
Replicate 38.5034321137249


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_86710.p1 GENE.S_Transcript_86710~~S_Transcript_86710.p1 ORF type:complete len:1050 (+),score=261.77,SMC_N|PF02463.15|4.1e-27,AAA_23|PF13476.2|3.2e-11,AAA_23|PF13476.2|1e+03,AAA_23|PF13476.2|1.6e+04 S_Transcript_86710:199-3348(+)
ATGGGCGATTTCTGGTCCGGCCCCGTCGCCGGTACAATTCGAAGAATCCGATTGGAGAATTTCATGTGTCATGGCAGTTTGGAGATTGAATTATGTGATCACGTCAATTTCATCACCGGCCAAAATGGAAGTGGTAAAAGTGCTATTTTGACTGCATTATGTATTGCTTTTGGATGTCGAGCTAAGAGTACTAACCGAGCGGCGACATTGAAGGATTTTATCAAGACTGGCGAAAGTTACGCTGCTGTGCATGTGGAAATTAAAAATGGAGGAGAAGATGCTTATAAGCAAGAAGTGTATGGTGACATCATAATTGTTGAGCGCAGGATAACTGAATCAACAACGTCAACTGTCATAAAGGATCGTCAAGGTAGGAGGGTTTCCAACAAGAAAGAAGAGCTCCGGGAACTTGTAGAACATTTTAATATTGATGTTGAGAATCCATGTGTGATAATGAGTCAAGACAAAAGCAGGGAATTTCTACATTCAGGAAATGCCAAAGACAAATTCAAGTTCTTTTTCAAGGCAACCCTTCTTCAGCAAGTTGATGATCTGTTGCGTACCATCGAAGGTCTACTTGAGCATGCCAAGGGTCTGGTTGAGGATCTGGAAAAATCAATTGAGCCCATACTCAGGGAGCTTAATGAGTTGCAAGAGAAGATTAAAAACATGGAACATGTAGAAGAATTGTCGGAGAGGGTAAAAGAGATGAAGTATAAACTTGCTTGGTCATGGGTCTATGATGTTGATCGAGAATTGCTAAAGCAAAGTGAAAGGGTTGAAAAGCTGAAGGCACGGATACCTGCCTGCCAAGCAGAAATAAATCAGAGACTTGAGAGAATTGATGGCTTGAGAAACAGTTACGAAAATAAAAGAAGTCACCATGAGCATATGATGAAGAAAACATCAGAAGTGAAGAAAATGAAGGATGATTTGCAGCAGAATCTTTCGATGGCAACAAAGTATATGCTGGAATTGAAGGAAGAATACAGCCGAAGAATGAATGATGTCCACAGGATGCAAAAGAAAATGAAGTCCCTTGAGCAGCAAATTTGTGATATTAAGGAGCAAAATTTGCAGAACACTCAGGCCGAAGAATCTGAGATGCAGGAGAAAATAAAAGCACTTGAAGATGAAGTCAATGCTGCTAATTTGCTGTTGACGAGGCTGAAGGAAGAAGAAACTTCTTTGTCAGAAAGCTTGTCTGCTAGAAGGGATGAAGTAAGAAAGATATCCGATCAGATTGAAGATTGTGTGAAAAAGCAGCGTGATATAAAGTCCTCAATCTATCAACTCCGTCAGCATCAGACGAACAAGGTAACTGCTTTTGGTGGAGAAAAAGTCATCGAGCTTCTGCGCACAATTGAAGCACGTCATCGTCATTTTACTAGACCACCTATTGGTCCAATCGGTGTTCATGTGACTTTGACTCGTGGTGATGCATGGGCATGTGCTGTTGAACATGCTATTGGGAGATTACTGAATTCCTTCATTGTGACTAATGTTAGAGATTCTCACTTGCTGAGATCTTGTGCTCGCGATGTACGTTATAATCATCTTCAGATTATCATATATGATTTCTCGATACCCAGGTACAACATTCCACACGACCGCCTTCCTCAAACAAGACACCCTACTACACTTTCTGTTATACACTTGGACAATGCTACAGTTTTTAATGTATTGGTGGATAAGGGTGGTGCTGAGAGGCAAGTTCTTGTGAAGGACTATGAGGTGGGAAAAACTGTTGCTTTTGAGGAACGGATTTTAAATTTGAAGGAGGTCTACACTGCAGAAGGCCATAAAATGTTTACACGTGGATCAGTTGAAACTGTGCTTCCTCCAATTAAAAGAGCTCGAACTGGGCGCCTTTGTAGCTCATATGATGATGAAATAAAGGAACTTGAAAGAGATGGATCTAACGTGCAAGAGAAGGCTCAAAGAGCTCACCAACAGAAAAGGGTTGCTGAGGAGGAGCTCCATGATCTTCAAGAGAAGTTACGAACAGTAAAGAGGAGATGTCAATCCGTGGAGCGGGATATAGCGTCAAAGAAATTTACTCTTGATGATGTCCAGCGTACATTTGCTGCTGAAGCTGCCACACCTGATGCATCTTCGGTTGATGAGCTTGGTGCCGAAATCTTGAGAATACAAACTGAAATACAAGAAAAAGAAACCTTGCTTGAGGAGCTTCAATCACGAATGGATAAAGCTCAAGTTAAGGTTGATAATCTGAAAGGGTCCTTGAAAAACTTAAGTGAATCAACAAATGAGGACATCAAAGCTCTCAATGAAGCTGAGGATGAGCTTACACAAATCGGACATCAATTAAAACATTTAGATATGGAAAAACAGCATTACGAAAATTTATTAAATGAGAAGATTGTACCAGATATCAGTCAGGCAGAAGCAAAATATCAAGAGCTTGAACAGAAACGCAAGGAAAGTTATGAGAAGGCCTCCTGTATCTGCCCTGAGAATGAAGTTGAAGCCTTGGAAGGCTGTAAAGAGAGTTCCCCAGAGCAACTCAGTGCTCAGCTGGTTCGAATGACTGAAAGACTAAAGCGTGCAAGGGACAAGTGCACAGAGTCCATTGATGACCTTCGAATGGTGTATGAGAAAAAGCAGCGTAAAATTCTTAAGAAACAGAAGACATATGAAAACTTCCGCCAGCAGTTAGAGTTCTCCCAAAGAGCTGTGGACAAGAGAAGAGATAAGTTTAGATATAATGCTACTCTTCTGAAGCGCCAATTGACATGGAACTTTAATGGACATCTGGGGAGGAAAGGGATCAGTGGTAAGATTCTCGTGAACTATGAAGAGAAAACACTCCTGATTGAGGTTAAGATGCCCCAAGATGCATCAAAAGATGCTGTTCAGGATACCAGAGGGCTTTCAGGTGGGGAACGTTCTTTCTCAACGTTGTGCTTTGCATTAGCTCTCCATCAAATGACAGAAGCCCCTTTTCGTGCTATGGATGAATTTGATGTATTTATGGATGCAGTGAGCCGAAAAATTAGCCTTGACACCCTAGTTGACTTTGCACTATCACAAGGATCACAGTGGATATTCATCACCCCTCATGATATCAGCATGGTGAAACAAGATGATAGAGTGAAGAAGCAGCAGATGTCAGCTCCTCGTTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_86710.p1 GENE.S_Transcript_86710~~S_Transcript_86710.p1 ORF type:complete len:1050 (+),score=261.77,SMC_N|PF02463.15|4.1e-27,AAA_23|PF13476.2|3.2e-11,AAA_23|PF13476.2|1e+03,AAA_23|PF13476.2|1.6e+04 S_Transcript_86710:199-3348(+)
MGDFWSGPVAGTIRRIRLENFMCHGSLEIELCDHVNFITGQNGSGKSAILTALCIAFGCRAKSTNRAATLKDFIKTGESYAAVHVEIKNGGEDAYKQEVYGDIIIVERRITESTTSTVIKDRQGRRVSNKKEELRELVEHFNIDVENPCVIMSQDKSREFLHSGNAKDKFKFFFKATLLQQVDDLLRTIEGLLEHAKGLVEDLEKSIEPILRELNELQEKIKNMEHVEELSERVKEMKYKLAWSWVYDVDRELLKQSERVEKLKARIPACQAEINQRLERIDGLRNSYENKRSHHEHMMKKTSEVKKMKDDLQQNLSMATKYMLELKEEYSRRMNDVHRMQKKMKSLEQQICDIKEQNLQNTQAEESEMQEKIKALEDEVNAANLLLTRLKEEETSLSESLSARRDEVRKISDQIEDCVKKQRDIKSSIYQLRQHQTNKVTAFGGEKVIELLRTIEARHRHFTRPPIGPIGVHVTLTRGDAWACAVEHAIGRLLNSFIVTNVRDSHLLRSCARDVRYNHLQIIIYDFSIPRYNIPHDRLPQTRHPTTLSVIHLDNATVFNVLVDKGGAERQVLVKDYEVGKTVAFEERILNLKEVYTAEGHKMFTRGSVETVLPPIKRARTGRLCSSYDDEIKELERDGSNVQEKAQRAHQQKRVAEEELHDLQEKLRTVKRRCQSVERDIASKKFTLDDVQRTFAAEAATPDASSVDELGAEILRIQTEIQEKETLLEELQSRMDKAQVKVDNLKGSLKNLSESTNEDIKALNEAEDELTQIGHQLKHLDMEKQHYENLLNEKIVPDISQAEAKYQELEQKRKESYEKASCICPENEVEALEGCKESSPEQLSAQLVRMTERLKRARDKCTESIDDLRMVYEKKQRKILKKQKTYENFRQQLEFSQRAVDKRRDKFRYNATLLKRQLTWNFNGHLGRKGISGKILVNYEEKTLLIEVKMPQDASKDAVQDTRGLSGGERSFSTLCFALALHQMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFALSQGSQWIFITPHDISMVKQDDRVKKQQMSAPRS*

Click here to download the sequence:
Link to NCBI Protein BLAST