Transcript Information: S_Transcript_86769.p1


Annotated TAIR IDAT5G65490.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SGT1 (InterPro:IPR010770); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:26178003-26180309 | Reverse length=643
E-Value3E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.2066598867651
Replicate 26.3206910624232
Replicate 38.1746181559743
Condition 2: 8 Hour
Replicate 111.066148488891
Replicate 29.9766352042024
Replicate 39.8513782174373
Condition 3: 24 Hour
Replicate 18.1475511397351
Replicate 28.6980033617333
Replicate 37.7029486966976


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_86769.p1 GENE.S_Transcript_86769~~S_Transcript_86769.p1 ORF type:5prime_partial len:370 (-),score=127.36,SGT1|PF07093.7|1.9e-13,SGT1|PF07093.7|8.5e-47 S_Transcript_86769:262-1371(-)
GAGAGACAAAGGGAGATGGAGAATGCTGAGGAATATTACAGGAAGAGTACCTTGCATCACAGGGTCAGTGAAATGTTAGGTACTCCTGTGGCGCGTATTGATGAGCTTCTTGCTTTACCATATTCACTGGATGATTTTAAAAGTGAAGAAGTTCCTCCATCGGATGATGACTCCTGGCTTTATGGTGGGGAGGAAGAGTTGAACTCTGTTCTTGCAGAGAGACAAAGGGAGATGGAGAATGCTGAGGAATATTACAGGAAGAGTACCTTGCATCACAGGGTCAGTGAAATGTTAGGTACTCCTGTGGCGCGTATTGATGAGCTTCTTGCTTTACCATATTCACTGGATGATTTTAAAAGTGAAGAAGTTCCTCCATCGGATGATGACTCCTGGCTTTATGGTGGGGAGGAAGAGTTGAACTCTGTTCTTGCAGAGAGACAAAGGGAGATGGAGCTCTTTGAACAGCAACATAAAGGGAAACAGAAAGGAAAGGATAAGGGTGTTGATAATGATTCATCCAACCTAAGTAAGAATGATTTTGATTTAGGAGATATAGCAAAATCTATGAAGTCGTTTGTTCATAAAGTATCGAGTTATCAAGGAGCAGAGGTCCCTGAGAACAGGGACCTGAAAGATGTGGAGTTTGACATGGAGCGTTTTATGAAAGAGTTGGAATCAGTAGCCAGGCCTCGAGCCAGCAGAGATGATGAAAGTGATGTTGATGCTGAGGAAGGATCTTCTTCGGATATGGATTTTGATGAATTTGATGATGAGGGTGATATTGAGGAAGACCCAGAAGAGTGTAGTGAAAATAAGCAGGAAGATTTTATGCAAGCTTATTCAGACTTCTTAAACGAAGAATTGAGGAGCACCACTCTGAAGAAGAGTTTTGTGCGGGCTAATGATGAAACTCCAAAGAAAAACGAGGGCATATCAAATGCGACAAAGGACATGGATGATGACTTTACCCCAGTAGATGTAGATATCAACTTGGTGAAGAGCTTGCTGGATTCATTTTCTTCTCAGCAAGGCCTTCCAGGTCCTGCTTCCAACTTACTCGGTCTTCTGGGCAAGCAGCTCCCACAAGATGATGCTAGCAAAGGCAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_86769.p1 GENE.S_Transcript_86769~~S_Transcript_86769.p1 ORF type:5prime_partial len:370 (-),score=127.36,SGT1|PF07093.7|1.9e-13,SGT1|PF07093.7|8.5e-47 S_Transcript_86769:262-1371(-)
ERQREMENAEEYYRKSTLHHRVSEMLGTPVARIDELLALPYSLDDFKSEEVPPSDDDSWLYGGEEELNSVLAERQREMENAEEYYRKSTLHHRVSEMLGTPVARIDELLALPYSLDDFKSEEVPPSDDDSWLYGGEEELNSVLAERQREMELFEQQHKGKQKGKDKGVDNDSSNLSKNDFDLGDIAKSMKSFVHKVSSYQGAEVPENRDLKDVEFDMERFMKELESVARPRASRDDESDVDAEEGSSSDMDFDEFDDEGDIEEDPEECSENKQEDFMQAYSDFLNEELRSTTLKKSFVRANDETPKKNEGISNATKDMDDDFTPVDVDINLVKSLLDSFSSQQGLPGPASNLLGLLGKQLPQDDASKGK*

Click here to download the sequence:
Link to NCBI Protein BLAST