Transcript Information: S_Transcript_86774.p1


Annotated TAIR IDAT5G65490.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SGT1 (InterPro:IPR010770); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26178003-26180309 | Reverse length=643
E-Value1.1E-283
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.524640935877
Replicate 218.886829039281
Replicate 316.719907751136
Condition 2: 8 Hour
Replicate 121.358047882703
Replicate 220.864404014691
Replicate 319.781628864653
Condition 3: 24 Hour
Replicate 118.33230651278
Replicate 216.173562319415
Replicate 317.265319830148


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_86774.p1 GENE.S_Transcript_86774~~S_Transcript_86774.p1 ORF type:complete len:653 (+),score=163.84,SGT1|PF07093.7|1.8e-192 S_Transcript_86774:240-2198(+)
ATGGCGGAAAATTACCAAGTAGATCCAGACGATCCATTCTTCGGCAAGCACTCAAGACTCCCAGACGACACCGTTTTCTACACCATCTACTCCGGCTGTTCTCTCTCCACCGCCACAAAAACGACCGAACAACAGCTCCAGTCTCTCCACCTCGAAATCCTCAAGACTCTCTCTCCTCTAACCTCCGATTACATATGGCAACACGAAACCTTCTCTCTCTCCCTGTCTTCTTCCGACCAAATCCCTCACCTTCACGGCAAGGTCAAGTTCGGCGACAACCTCGACGACGAATGGTTTGTCGTTTTCCTCCTCTTTCACCTCTCTCTCTCCTTCCCTTCTCTCTCTATCCGTGTTTGGGATACTGATGGTGAGTTCCTTCTCATTGAAGCCGCCTTTCATCTGCCACGTTGGCTCAACCCTGAGAATTCTACCAATCGTGTTTTTATCCGGCAGAACGAGGTTCATATTATTCCTAGAAAGCAGTTTCCTTCCACTCCTGCTTTGAAAGATGCTCTCAAGTTTTTGATTGAGCATCCTGAGATTACTAGGGCTTCGGATTCCGTTCAATACGCTGTTAAGGGTCGCCTTTCTGATTATCCTCAGCGCGCCACCCGGAATGTTCACCGTGTTCGGGTTCGGGTTCCTCTTTCTGTTGCTCAGGTGTTGAGGCATGAACCGTGCCTGATCTCCGTGGCAGTTGAGGGATTCTATGATCGAGATATTGATACGATGAAATTTGCTGCTAAGATGGAGAAGTTTTTGCCCAAGGGAACTGGGGAGGATCTGGTTTTGGTGTCTGTGAAGATGTCTAGGGCAATGTATGCTCAGTTGTTGCAGCAGAAGTTTCAGGCGCCTAAATGTTATCCAATGCCGCCTATGCCACCAAGGACTGATCAGTGTACTTATATGGAGGCTGAGCTCGGTATGAAGATTGCTTGTGGGTTTGAGATGATGTATCAACAGCGGAAGAGGGAGGGGGAGGAAGGGAAGGGGAGTACTTGGGAGGCGTTTAAGGAGACCTTAGAGAAGAGTGGGTATTTTCAAGGGCAGCTTCCAGGGTCTAAAGAGTATAAGAGGTTGATGGAGAATGCTGAGGAATATTACAGGAAGAGTACCTTGCATCACAGGGTCAGTGAAATGTTAGGTACTCCTGTGGCGCGTATTGATGAGCTTCTTGCTTTACCATATTCACTGGATGATTTTAAAAGTGAAGAAGTTCCTCCATCGGATGATGACTCCTGGCTTTATGGTGGGGAGGAAGAGTTGAACTCTGTTCTTGCAGAGAGACAAAGGGAGATGGAGCTCTTTGAACAGCAACATAAAGGGAAACAGAAAGGAAAGGATAAGGTTGTTGATAATGATTCATCCAACCTAAGTAAGAATGATTTTGATTTAGGAGATATAGCAAAATCTATGAAGTCGTTTGTTCATAAAGTATCGAGTTATCAAGGAGCAGAGGTCCCTGAGAACAGGGACCTGAAAGATGTGGAGTTTGACATGGAGCGTTTTATGAAAGAGTTGGAATCAGTAGCCAGGCCTCGAGCCAGCAGAGATGATGAAAGTGATGTTGATGCTGAGGAAGGATCTTCTTCGGATATGGATTTTGATGAGTTTGATGATGAGAGTGATATTGAGGAAGAACCAGAAGAGTGTAGTGAAAATAAGCGGGAAGATTTTATGCATGCTTATTCAGACATCTTAAACGAAGAATTGAGGAGCACCACTCTGAAGAAGAGTTTTGTGCGGGCTAATGATGAAACTCCAAAGAAAAACGAGGGCATATCAAATGCGACAAAGGACATGGATGATGACTTTACCCCAGTAGATGTAGATATCAACTTGGTGAAGAGCTTGCTGGATTCATTTTCTTCTCAGCAAGGCCTTCCAGGTCCTGCTTCCAACTTACTTGGTCTTCTGGGCAAGCAGCTCCCACAAGATGATGCTAGCAAAGGCAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_86774.p1 GENE.S_Transcript_86774~~S_Transcript_86774.p1 ORF type:complete len:653 (+),score=163.84,SGT1|PF07093.7|1.8e-192 S_Transcript_86774:240-2198(+)
MAENYQVDPDDPFFGKHSRLPDDTVFYTIYSGCSLSTATKTTEQQLQSLHLEILKTLSPLTSDYIWQHETFSLSLSSSDQIPHLHGKVKFGDNLDDEWFVVFLLFHLSLSFPSLSIRVWDTDGEFLLIEAAFHLPRWLNPENSTNRVFIRQNEVHIIPRKQFPSTPALKDALKFLIEHPEITRASDSVQYAVKGRLSDYPQRATRNVHRVRVRVPLSVAQVLRHEPCLISVAVEGFYDRDIDTMKFAAKMEKFLPKGTGEDLVLVSVKMSRAMYAQLLQQKFQAPKCYPMPPMPPRTDQCTYMEAELGMKIACGFEMMYQQRKREGEEGKGSTWEAFKETLEKSGYFQGQLPGSKEYKRLMENAEEYYRKSTLHHRVSEMLGTPVARIDELLALPYSLDDFKSEEVPPSDDDSWLYGGEEELNSVLAERQREMELFEQQHKGKQKGKDKVVDNDSSNLSKNDFDLGDIAKSMKSFVHKVSSYQGAEVPENRDLKDVEFDMERFMKELESVARPRASRDDESDVDAEEGSSSDMDFDEFDDESDIEEEPEECSENKREDFMHAYSDILNEELRSTTLKKSFVRANDETPKKNEGISNATKDMDDDFTPVDVDINLVKSLLDSFSSQQGLPGPASNLLGLLGKQLPQDDASKGK*

Click here to download the sequence:
Link to NCBI Protein BLAST