Transcript Information: S_Transcript_86778.p1


Annotated TAIR IDAT5G61980.1
Annotated Gene NameARF-GAP domain 1
Annotated Gene Symbol(s)AGD1
Annotation TypeOrtholog
Chromosome Positionchr5:24894472-24899178 | Forward length=828
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.4249645759207
Replicate 24.9523363733614
Replicate 34.3149869459255
Condition 2: 8 Hour
Replicate 17.5727929986019
Replicate 27.7052685338726
Replicate 38.7339280566729
Condition 3: 24 Hour
Replicate 14.2029348283566
Replicate 24.3604958139766
Replicate 33.3249963526935


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_86778.p1 GENE.S_Transcript_86778~~S_Transcript_86778.p1 ORF type:complete len:842 (+),score=147.48,BAR_3|PF16746.1|1.7e-39,ArfGap|PF01412.14|4.7e-33,Ank_5|PF13857.2|1.2e-07,Ank_5|PF13857.2|5.7e-09,Ank_2|PF12796.3|9.8e-08,Ank_2|PF12796.3|1.9e-08,PH|PF00169.25|4.5e-13,BAR|PF03114.14|1.5e-11,Ank_4|PF13637.2|2e+03,Ank_4|PF13637.2|2.7e-09,Ank_4|PF13637.2|1e+03,Ank|PF00023.26|7e+02,Ank|PF00023.26|3.5e-05,Ank|PF00023.26|2.2,Ank_3|PF13606.2|4.3e+02,Ank_3|PF13606.2|0.004,Ank_3|PF13606.2|5.5,Ank_3|PF13606.2|1.6e+03 S_Transcript_86778:429-2954(+)
ATGTTGTGTTACAGGCATCCTCATTGGAAACGCATGAGCGGTGGTTCAAAGATGAACTTCTCAAAGCTCGATGATTCTCCCATGTTTAGGACTCAGCTTCAGTGCTTGGAGGAGAGTGCTGAATTGTTAAAGGAGAGGAGTTTGAAGTTTTACAAAGGATGTCACAAGTACACGGAAGGTCTTGGAGAGGGTTACGATTCGAACATTTCTTTTGCAAGCGCTCTTGAAACCTTTGGAGGAGGGAATAATGATCCTTTAGGGGTTGCTTTTGGAGGCCCGATCATGACAAAGTTTACTATTGCCTTGAGAGAGATTGGTACCTACAAGGAAGTTCTTCGATCTCAGGTGGAGAATTTACTGAATGTTAAGTTGCTGCAGTTTGTCAATGTCGACCTATATGATGTCAAGGAAGCTAGAAAACGCTTTGACAAGGCTACTGCTATGTATGATCAGGCACGTGAAAAGTTTTTGTCTCTGAAGAAAACTACCAGGAAAGATACAGTTGCGGCCGTAGAAGAGGAACTGCACACAGCGAGAGCTATGTATGAGCAAGCCCGTTTCAATTTGGTTGCCGCTCTTTCAACTGTTGAGGCCAAAAAACGTTACGAGTTCCTAGAAGCAGTTACCCGGGCAATGGATGCCCATCTCCATTACTTTAAGCAGGGATATGAACTGTTTCATCAGATGGAGCCTTATATCAAACAGATTCTCACCTATACGGAGCAGTCAAAACAAAGTTCAGATCATGAGCTCACATCACTTAATACAAAGATGCAGGAATACAAAAGGCAGATTGATCAGCAAAGTCGACCATCTGTATACGGATCTTGTGATCCTCCTAAAGAGGAGGGTCCACAACCCTTATCCATAAACTCTGCAAAGACAATAGAGGAAGTTATGCAGTCTTCTGCCAATGGAAAGGTTCATATTATTCGACAAGGATATCTGTTCAAGCGTTCTTCTAATTTGAGGGGTGATTGGAAAAGGAGGTTTTTTGTTCTTGACAGTCGTGGGATGTTGTACTACTATCGCAAGCCACGAAGCAGGGCAGCTATGGCCACCAGTAAGCTGGCCAGTCCTCTTAACAGTCATTCTGATCCTGGATCAGGAGTACTTGGTCGATGGATTTCTACTCATTACCATACTGGTACTATTTACGAAGAGAAGTCTGTGGCACGTCACACTGTCAACCTGCTAACATCAACAATTAAGCCTGATGCAGAACAGTCAGATATGAGGTATTGCTTCAGGATCATATCTCCAGTCAAGACCTATACCTTACAGGCTGAGAATGCAGCCGATCAAATGGAGTGGATTGAGAAGATAAGAGGAGTAATCGCTTCATTGTTGACCTCACAGGCCATTGAAGGGCGTCTTTCAATGAGGATGGATCAAAGAGATACAGGCAGTGTAACAGATAGCTGCTCCTCTGAATGTTCTTCTACTTCCAATCCAGCAGCTACTGAAGAATGTGCATCAAATTCTAGTGGACTTCGCAGTTTCCAGCAGCAACGACATAGTATGAGACTTGAAAAACCAATTGACGTCTTGAGGAAGGTGGCTGGTAATGAAAAGTGTGCTGATTGTGGGGCTCCAGGACCAGACTGGGCATCCTTAAACCTAGGCATTCTCATTTGTATAGAATGTTCTGGTGTACATCGCAACCTTGGTGTTCATATATCAAAGGTAAGGTCACTAACATTGGATGTCAGAGTGTGGGAGCATTCTGTCATATCTTTGTTTCAATCACTGGGTAATGTCTATACAAATTCAGTCTGGGAAGAATTTTTGCATGCCAGAAATTTCTCTGGGGTGGATGAACGACCTGTAATTTTCCCAAAGTCAGAGGCGCACAAACCGGCATTCATGAAGAAACCCACACCTAGTGATCCTGTTGCAGTAAAAGAGTTATTTATTCATGCAAAGTATGAAGAAAAAGTTTTTGTTCGCACGATGAAGGGAGCTTCACATATCTTCTCAGTGTCGCAACAGATGTGGGAAAGTGTCCGTGCCAACAATAAGAAAGCAGTTTATCGCCTCATTGTATGCTCTGGAGCAGATGTCAATGCCATGCACCGACAAGTAACATCTACTAAGTCATTTATTTTGCCAAGAGGAAGAACTCAAGGTGAGACTCCCCGAGTCCGCAACTCTGACAGATCTGAATCTGCAGATAGGTCTGCCTCTAGATCACAGAGCACACTCACCAAGGGTAAAGGCCCGTTCAGAGAAGATTCTTTTGACGATTGTTCTCTGCTTCACCTAGCCTGTCAATTCGCCGATGTAGGCATGGTGGAGCTACTCTTACAGTATGGTGCAGATATAAATGCTGTTGATTCGAAAGGCCAAACACCACTTTACCACTGTATCGTGGGGAGAAAAGCTGATATAGCAAAAGTGCTGCTCATGAGGGGAGCTAGTGCAAAGGTCAAGGATAAGCAAGGTAGATCTGCACTGCAGCTAGCTATGGATTCTGGGATAAATGACAATGAGCTTTTGGCCCTCCTAAGAGATAATAGTAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_86778.p1 GENE.S_Transcript_86778~~S_Transcript_86778.p1 ORF type:complete len:842 (+),score=147.48,BAR_3|PF16746.1|1.7e-39,ArfGap|PF01412.14|4.7e-33,Ank_5|PF13857.2|1.2e-07,Ank_5|PF13857.2|5.7e-09,Ank_2|PF12796.3|9.8e-08,Ank_2|PF12796.3|1.9e-08,PH|PF00169.25|4.5e-13,BAR|PF03114.14|1.5e-11,Ank_4|PF13637.2|2e+03,Ank_4|PF13637.2|2.7e-09,Ank_4|PF13637.2|1e+03,Ank|PF00023.26|7e+02,Ank|PF00023.26|3.5e-05,Ank|PF00023.26|2.2,Ank_3|PF13606.2|4.3e+02,Ank_3|PF13606.2|0.004,Ank_3|PF13606.2|5.5,Ank_3|PF13606.2|1.6e+03 S_Transcript_86778:429-2954(+)
MLCYRHPHWKRMSGGSKMNFSKLDDSPMFRTQLQCLEESAELLKERSLKFYKGCHKYTEGLGEGYDSNISFASALETFGGGNNDPLGVAFGGPIMTKFTIALREIGTYKEVLRSQVENLLNVKLLQFVNVDLYDVKEARKRFDKATAMYDQAREKFLSLKKTTRKDTVAAVEEELHTARAMYEQARFNLVAALSTVEAKKRYEFLEAVTRAMDAHLHYFKQGYELFHQMEPYIKQILTYTEQSKQSSDHELTSLNTKMQEYKRQIDQQSRPSVYGSCDPPKEEGPQPLSINSAKTIEEVMQSSANGKVHIIRQGYLFKRSSNLRGDWKRRFFVLDSRGMLYYYRKPRSRAAMATSKLASPLNSHSDPGSGVLGRWISTHYHTGTIYEEKSVARHTVNLLTSTIKPDAEQSDMRYCFRIISPVKTYTLQAENAADQMEWIEKIRGVIASLLTSQAIEGRLSMRMDQRDTGSVTDSCSSECSSTSNPAATEECASNSSGLRSFQQQRHSMRLEKPIDVLRKVAGNEKCADCGAPGPDWASLNLGILICIECSGVHRNLGVHISKVRSLTLDVRVWEHSVISLFQSLGNVYTNSVWEEFLHARNFSGVDERPVIFPKSEAHKPAFMKKPTPSDPVAVKELFIHAKYEEKVFVRTMKGASHIFSVSQQMWESVRANNKKAVYRLIVCSGADVNAMHRQVTSTKSFILPRGRTQGETPRVRNSDRSESADRSASRSQSTLTKGKGPFREDSFDDCSLLHLACQFADVGMVELLLQYGADINAVDSKGQTPLYHCIVGRKADIAKVLLMRGASAKVKDKQGRSALQLAMDSGINDNELLALLRDNSR*

Click here to download the sequence:
Link to NCBI Protein BLAST