Transcript Information: S_Transcript_86840.p1


Annotated TAIR IDAT3G05000.1
Annotated Gene NameTransport protein particle (TRAPP) component
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:1387444-1388697 | Reverse length=173
E-Value1.6E-105
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 155.782053436452
Replicate 249.734762900838
Replicate 344.804387095753
Condition 2: 8 Hour
Replicate 149.879726504481
Replicate 256.87758128744
Replicate 356.119689174697
Condition 3: 24 Hour
Replicate 142.45559277268
Replicate 245.327623152695
Replicate 351.726565644391


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_86840.p1 GENE.S_Transcript_86840~~S_Transcript_86840.p1 ORF type:complete len:177 (+),score=21.72,TRAPP|PF04051.12|1.2e-44 S_Transcript_86840:102-632(+)
ATGGGGAGGGAAGTATCAGAGAGCTGTGTAGACAGTTTGTTGATAGAAATGGTATCCTGTTATTCGGATCGTTTCTACGCCAACAAACCCGAACTCGCTGCTCGTCGTATTGAGGCCATTGGTTATCAGGTTGGCCATCAACTTTCCGAGAGGTATACTATGGAGAGGCCACGGTTTAGTGACCATCTTGAGGCAATCAAATTTATCTGTAAGGATTTCTGGTCTGAAATCTTCAAGAAACAGATAGACAACCTGAAGACAAATCATAGAGGTACCTTTGTGCTTCAAGATAATCGATTTCGCTGGCTTGCACACATGTCCATTGATCCGGCATCTGATGGTTCTGGTTTGACTCAAGATGCTTCTGGGACCTTGGTGGAAAACAAAGCGGCTCAAGCTGCAAGCATGTATCTCTACTTTCCATGTGGAATCATAAGGGGAGCACTGACTAACTTGGGAATACCTTGTGCTGTTTCAGCAGATATATCCAATCTTCCTGCATGTTCATTTGTTGTACGGATAAAGGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_86840.p1 GENE.S_Transcript_86840~~S_Transcript_86840.p1 ORF type:complete len:177 (+),score=21.72,TRAPP|PF04051.12|1.2e-44 S_Transcript_86840:102-632(+)
MGREVSESCVDSLLIEMVSCYSDRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFSDHLEAIKFICKDFWSEIFKKQIDNLKTNHRGTFVLQDNRFRWLAHMSIDPASDGSGLTQDASGTLVENKAAQAASMYLYFPCGIIRGALTNLGIPCAVSADISNLPACSFVVRIKV*

Click here to download the sequence:
Link to NCBI Protein BLAST