Transcript Information: S_Transcript_86856.p1


Annotated TAIR IDAT4G04890.1
Annotated Gene Nameprotodermal factor 2
Annotated Gene Symbol(s)PDF2
Annotation TypeOrtholog
Chromosome Positionchr4:2476970-2480090 | Reverse length=743
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.558418968305
Replicate 28.8431017927539
Replicate 38.1438712325682
Condition 2: 8 Hour
Replicate 112.285279204435
Replicate 210.912355518562
Replicate 310.947541297124
Condition 3: 24 Hour
Replicate 14.3630405884747
Replicate 25.5735732273354
Replicate 35.2431695570418


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_86856.p1 GENE.S_Transcript_86856~~S_Transcript_86856.p1 ORF type:complete len:736 (+),score=133.94,START|PF01852.15|5.3e-58,START|PF01852.15|3.6e+03,START|PF01852.15|6.7e+03,Homeobox|PF00046.25|8.3e-18 S_Transcript_86856:412-2619(+)
ATGTTTCAGCCAAATATGTTTGAGACACACCATCAGCTGCTAGACATAAGTGCAGCACACAAAAATCCAGAGAGTGAAATGGGGAAATTAAGAGATGATGAATTTGAGAGCAGTAGATCAGCCACTGAGAATTTGGAGGGACTTTCTGGTGATGATCAAGACCCGAATCAACGGCCCAAAAAGAAGAGATATCATCGCCATACTCAACACCAAATTCAAGAGATGGAGAATTTCTTCAAGGAATGTCCTCATCCAGATGATAAGCAAAGGAAGGAGTTGAGTCGTAGATTGGGTTTGGAGCCATTACAAGTTAAATTTTGGTTCCAAAACAAGCGCACTCAAATGAAGGCCCAACATGAGCGTTCCGAGAACCAACAACTTCGAGCTGAAAATGAAAAGCTTCGAGCTGATAACATACGGTTCAAGGAAGCTCTTAGTAACGCTACGTGCCCTAATTGTGGAGGCCCTGCTGCTCTTGGTGAGATGTCTTTCGACGAGCAACAACTTAGAATTGAAAATGCTCGACTTAGAGAAGAGATTGATAGGATTTCAGGGATAGCAGCAAAGTATGTAGGAAAGCCATTAGTGACATACCCTCATATGTCACCACACCTACCTTCGCGGTCCTCCCTAGACCTTGGAGTCGGGAGCTTTGGGCCACAATCCGGGATGGTTGGAGACATGTATGCAAGCTCTGCAGGGGATATCCTCCGATCAGTGGCTCCACCCACCGAGGCAGACAAGCCTATGATCATTGAGCTCGCGGTGGCAGCCATGGAGGAACTTATAAGGATGGCTCAAACAGTCGATCCACTTTGGGTTCCAAGCCCTGATAATACAACTGAGATCCTCAATGAAGAAGAGTACTTCAGAACATTCCCTCGAGGGATTGGACCGACCCCAATGGGGTTGAAATCCGAGGCTTCTAGAGACTCCGCTGTTGTCATCATGAATCATATGAATCTTGTCGAAATCCTCATGGATGTGAATCAATGGTCATGTGTTTTCTCTGGGATCGTATCAAGAGCTATGACACTCGATGTTTTATCGACTGGTGTTGCTGGGAATTACAATGGTGCTTTGCAAGTGATGACAGCTGAGTTTCAAGTACCATCTCCTCTCGTTCCAACTCGTGAGAACTACTTTGTGAGGTATTGCAAGCAACATGGGGATGGTACATGGGCTGTGGTGGATGTTTCATTGGATATTTTGCGCCCTAGCCCTAGCCCCATCCCAAGGTGTCGTCGGAGGCCCTCCGGTTGCCTTATACAAGAATTGCCCAACGGTTACTCCAAGGTGACATGGGTTGAACATGCCGAAATAGATGACAGGGCAGTCCATAACATATACAGAGCACTAGTAAATTCAGGGCTTGCATTTGGTGCTAAACGTTGGGTTTCGACTTTGGATAGACAATGTGAAAGACTTGCTAGTGTAATGGCTAGCAACATTCCATCTGGCGAGGGTGGTGTGATTACAAGTCCGGAAGGAAGGAAGAGCATGTTGAAGCTAGCGGAGAGGATGGTGATGAGCTTCTGTGCAGGTGTAGGAGCTTCGACAGCCCACACATGGACCACATTATCTGGAAGTGGTGCTGATGATGTTCGAGTCATGACCCGTAAGAGCATGGATGACCCTGGTAGACCCCCTGGCATTGTGCTTAGTGCCGCTACTTCTTTCTGGATGCCTGTGCCTCCCAAACGTGTCTTCGATTTCCTTCGTGATGAGAACTCTAGGAGCGAGTGGGATATCCTCTCTAATGGTGGCCTAGTCCAAGAAATGGCTCACATAGCCAATGGCCGCGATCCTGGAAACTGTGTTTCGCTCCTACGAGTGAATAGTGCAAATTCGAGCCAGAGCAATATGCTAATACTCCAAGAGAGCTGCACGGATGCAACAGGCTTCTATGTAATCTATGCACCGGTGGACATAGTCGCAATGAACGTGGTTTTGAATGGAGGGGACCCTGACTATGTCGCGCTCTTGCCATCAGGGTTTGCGATACTGCCTGATGGTCAGGTGGGTGCTCATGGCGGAGGGGCCCTGGAGGTGGGCTCCGGGGGCTCGTTGCTAACCGTGGCATTTCAAATTCTGGTGGATTCGGTCCCTACAGCCAAGCTCTCCTTAGGCTCTGTGGCAACTGTTAATAGTCTGATTAAGTGCACAGTTGAGAGAATTAAGGCTGCCGTGGCTGGTGATAGCTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_86856.p1 GENE.S_Transcript_86856~~S_Transcript_86856.p1 ORF type:complete len:736 (+),score=133.94,START|PF01852.15|5.3e-58,START|PF01852.15|3.6e+03,START|PF01852.15|6.7e+03,Homeobox|PF00046.25|8.3e-18 S_Transcript_86856:412-2619(+)
MFQPNMFETHHQLLDISAAHKNPESEMGKLRDDEFESSRSATENLEGLSGDDQDPNQRPKKKRYHRHTQHQIQEMENFFKECPHPDDKQRKELSRRLGLEPLQVKFWFQNKRTQMKAQHERSENQQLRAENEKLRADNIRFKEALSNATCPNCGGPAALGEMSFDEQQLRIENARLREEIDRISGIAAKYVGKPLVTYPHMSPHLPSRSSLDLGVGSFGPQSGMVGDMYASSAGDILRSVAPPTEADKPMIIELAVAAMEELIRMAQTVDPLWVPSPDNTTEILNEEEYFRTFPRGIGPTPMGLKSEASRDSAVVIMNHMNLVEILMDVNQWSCVFSGIVSRAMTLDVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQHGDGTWAVVDVSLDILRPSPSPIPRCRRRPSGCLIQELPNGYSKVTWVEHAEIDDRAVHNIYRALVNSGLAFGAKRWVSTLDRQCERLASVMASNIPSGEGGVITSPEGRKSMLKLAERMVMSFCAGVGASTAHTWTTLSGSGADDVRVMTRKSMDDPGRPPGIVLSAATSFWMPVPPKRVFDFLRDENSRSEWDILSNGGLVQEMAHIANGRDPGNCVSLLRVNSANSSQSNMLILQESCTDATGFYVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGQVGAHGGGALEVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAAVAGDSC*

Click here to download the sequence:
Link to NCBI Protein BLAST