Transcript Information: S_Transcript_87081.p1


Annotated TAIR IDAT5G54600.1
Annotated Gene NameTranslation protein SH3-like family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22183046-22184403 | Forward length=198
E-Value1.6E-92
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1309.25733131775
Replicate 2314.00077280963
Replicate 3367.29038245063
Condition 2: 8 Hour
Replicate 1417.27315071426
Replicate 2455.42691873729
Replicate 3448.77472011202
Condition 3: 24 Hour
Replicate 1250.63102933405
Replicate 2340.86777321748
Replicate 3290.27870748388


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_87081.p1 GENE.S_Transcript_87081~~S_Transcript_87081.p1 ORF type:complete len:224 (+),score=53.87,KOW|PF00467.25|4e-08 S_Transcript_87081:81-674(+)
ATGGCAGCCATGGCTGCTCTTCAAAGCTCCTTCACTTCTCTTTCTATCTCCTCCAACTCTTTTCTTGGGCAACGGCTCTTCCCTTCTACTCTCAACCCTCAGTCCTTGCAGCTCAAGCCCACAGAGCAGCCACCATGTCTAATCGTCATGAGGCTCAAGCGCTGGGAGCGAAAAGATTGTAAGCCAAACAGTCTTCCAGTGCTTCATAAAATGCATGTCAGGCTTGGGGATACAGTCAAAGTAATAGCCGGAAGTGAAAAAGGTAAGATTGGAGAGATCACTAAGATCTTCAAACACAACAGCACAGTTATTGTCAAGGACACTAACTTGAAGACAAAGCATGTGAAGAGTAAAGGAGAGAATGAACCAGGTCAGATAATCAAGATTGAGGGACCTATCCACAGTTCCAATGTCATGCTATACTCAAAGGAGAAGGAAGTGGCCAGTCGGGTTGGTCATAAAATGCTTGACAATGGAACAAAAGTTCGTTACCTCATTAAAACTGGAGAGATCATCGACAGTCCAGAGAAGTGGAAGGAAAGGATAGCAAGTAAGAAGGAAACTGAGACAGCTGTTGCTGCTCCTGCTTCGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_87081.p1 GENE.S_Transcript_87081~~S_Transcript_87081.p1 ORF type:complete len:224 (+),score=53.87,KOW|PF00467.25|4e-08 S_Transcript_87081:81-674(+)
MAAMAALQSSFTSLSISSNSFLGQRLFPSTLNPQSLQLKPTEQPPCLIVMRLKRWERKDCKPNSLPVLHKMHVRLGDTVKVIAGSEKGKIGEITKIFKHNSTVIVKDTNLKTKHVKSKGENEPGQIIKIEGPIHSSNVMLYSKEKEVASRVGHKMLDNGTKVRYLIKTGEIIDSPEKWKERIASKKETETAVAAPAS*

Click here to download the sequence:
Link to NCBI Protein BLAST