Transcript Information: S_Transcript_87210.p1


Annotated TAIR IDAT2G44850.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0565 (InterPro:IPR018881); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G45380.1); Has 138 Blast hits to 138 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 73; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:18498672-18500823 | Forward length=400
E-Value2E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1216207417126
Replicate 20.84531760756762
Replicate 30.91860371297627
Condition 2: 8 Hour
Replicate 12.1243683840822
Replicate 22.0571814841128
Replicate 31.3883885413206
Condition 3: 24 Hour
Replicate 11.7576343038409
Replicate 22.2576977049235
Replicate 31.352906596443


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_87210.p1 GENE.S_Transcript_87210~~S_Transcript_87210.p1 ORF type:3prime_partial len:261 (+),score=39.31 S_Transcript_87210:264-1043(+)
ATGTTTTTGATGAAAGATTGTATATTTAGTAATCTTTCTTGTTTTCTCTATCTGGGTTTTGTTTTCTTTGTAGAAATCTTTCTTGTTTTCTCTATCTGGGATTTGTTTTCTTTGTTTTCTCTAACTGCCCCAAACCCGCATCCTATTCGGGTCGACCCAAGAATGGACCGTTGCACAGGTATCTTGAAAGTTCCTGTATACCCAAATGGCAATACTCTCTGTAGAGTAGCTGCATCTCTTTGCATTTCTCCTTCTTCAAAATCCCTTCTTGTGCCTACTGCTAATGCAATATTCTTTAATGGAGACAAGGTTGAAGGAACTGGTAACCCAGTTATTGAAAGATTGTCTGATTTACAAAACATAGCCAAGATTCTAGTCTCCAAATTTGGTGCTTCGATCAATGCTTGGGTTATTGAAGCTCCAATCTTTAATGGGCCTTTTGCTGTTTATAAGGAATTTCTTCCTTCTCTTAGTAACTGGGGTGAACCCCATTCTTATAAACATGATGGGTTTCCTGCATCGACTTCTGTTGTTTCACTTCTTTCAAGTTTTCTTCATGAGAGAGCGGAAAATTCTACCCAGGAGGAACATCACCACCCTACACCATCTGTATCCACTTGTTTCCCCAGAACTTTTATACTCGGTTTTAGCAAGGTTGGTGTAGTGCTGAATCAGTTAGTCACTGAGCTTGGCTTTGTGGACATAAAACGCATGGAGGGTCCAGCACAAGCTGACGTGCAGAACCAGATTATACCTGGGTCAAGAGAGAGCTTCTTGGAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_87210.p1 GENE.S_Transcript_87210~~S_Transcript_87210.p1 ORF type:3prime_partial len:261 (+),score=39.31 S_Transcript_87210:264-1043(+)
MFLMKDCIFSNLSCFLYLGFVFFVEIFLVFSIWDLFSLFSLTAPNPHPIRVDPRMDRCTGILKVPVYPNGNTLCRVAASLCISPSSKSLLVPTANAIFFNGDKVEGTGNPVIERLSDLQNIAKILVSKFGASINAWVIEAPIFNGPFAVYKEFLPSLSNWGEPHSYKHDGFPASTSVVSLLSSFLHERAENSTQEEHHHPTPSVSTCFPRTFILGFSKVGVVLNQLVTELGFVDIKRMEGPAQADVQNQIIPGSRESFLD

Click here to download the sequence:
Link to NCBI Protein BLAST