Transcript Information: S_Transcript_87211.p1


Annotated TAIR IDAT2G44850.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0565 (InterPro:IPR018881); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G45380.1); Has 138 Blast hits to 138 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 73; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:18498672-18500823 | Forward length=400
E-Value3E-74
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.9203287938509
Replicate 22.6875352718786
Replicate 32.9257598319593
Condition 2: 8 Hour
Replicate 13.3226528822729
Replicate 24.6264729481588
Replicate 32.9588570329861
Condition 3: 24 Hour
Replicate 13.5273607902659
Replicate 24.4300368237053
Replicate 33.7868791883035


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_87211.p1 GENE.S_Transcript_87211~~S_Transcript_87211.p1 ORF type:complete len:353 (+),score=52.27,UPF0565|PF10561.5|1.1e+02,UPF0565|PF10561.5|2e-10 S_Transcript_87211:673-1731(+)
ATGAATAAAAGAACTAATTTCTCCACAAAAAAAAAAAATCCCCAAACCCGTATCCCTTTTCGGGTCGACCCAAGAATGGACCGTTGCACAGGTATCTTGAAAGTTCCTGTATACCCAAATGGCAATACTCTCTGTAGAGTAGCTGCATCTCTTTGCATTTCTCCTTCTTCAAAATCCCTTCTTGTGCCTACTGCTAATGCAATATTCTTTAATGGAGACAAGGTTGAAGGAACTGGTAACCCAGTTATTGAAAGATTGTCTGATTTACAAAACATAGCCAAGATTCTAGTCTCCAAATTTGGTGCTTCGATCAATGCTTGGGTTATTGAAGCTCCAATCTTTAATGGGCCTTTTGCTGTTTATAAGGAATTTCTTCCTTCCCTTAGTAATTGGGGCGAACCCTATTATTATAAACATGATGGGTTTCCTGCATCGACTTCTGTTGTTTCACTTCTTTCAAGTTTTCTTCATGAGAGAGCGGAAAATTCTACCCAGGAGGAACATCACCACCCTACACCATCTGTATCCACTTGTTTCCCCAGAACTTTTATACTCGGTTTTAGCAAGGTTGGTGTAGTGCTGAATCAGTTAGTCACTGAGCTTGGCTTTGTGGACATAAAATGCATGGAGGGACCAGCACAAGCTGACCTGCAGAGCCAGATTATACCCAGGTCAAGAGAGAGCTTCTTGGACAGCATAACTGAGATCCACTATGTCGATGTTGGGTTGAATACCCCTGGTGCTTACCTCACTGACCATAATGTTATCGAGAGAATAGCTGGCCGGCTGATACAGAGGGATGGTCACTTGTGTTTCATGCTTCACGGGACCCCAAGGCAGTGGAACGACAAGAGGCGAGCCTGGATTTGTGATGAAAAGGACCAGTTCTGTCAAGTGCTTGAAGCCAAAAGGCTGAAGTGTATGGGTAAGCTCCAAGTCTGTGAGAGAGTATATTTTGCTGACAAGAATCCTGATATGCAGATGCATTTTGAAATAATCGAAGAATTTATTGTATTCATTGATGCTCGACATAGATTGACACTAGATATACATGTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_87211.p1 GENE.S_Transcript_87211~~S_Transcript_87211.p1 ORF type:complete len:353 (+),score=52.27,UPF0565|PF10561.5|1.1e+02,UPF0565|PF10561.5|2e-10 S_Transcript_87211:673-1731(+)
MNKRTNFSTKKKNPQTRIPFRVDPRMDRCTGILKVPVYPNGNTLCRVAASLCISPSSKSLLVPTANAIFFNGDKVEGTGNPVIERLSDLQNIAKILVSKFGASINAWVIEAPIFNGPFAVYKEFLPSLSNWGEPYYYKHDGFPASTSVVSLLSSFLHERAENSTQEEHHHPTPSVSTCFPRTFILGFSKVGVVLNQLVTELGFVDIKCMEGPAQADLQSQIIPRSRESFLDSITEIHYVDVGLNTPGAYLTDHNVIERIAGRLIQRDGHLCFMLHGTPRQWNDKRRAWICDEKDQFCQVLEAKRLKCMGKLQVCERVYFADKNPDMQMHFEIIEEFIVFIDARHRLTLDIHV*

Click here to download the sequence:
Link to NCBI Protein BLAST