Transcript Information: S_Transcript_87216.p1


Annotated TAIR IDAT2G44850.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0565 (InterPro:IPR018881); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G45380.1); Has 138 Blast hits to 138 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 73; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:18498672-18500823 | Forward length=400
E-Value3.7E-103
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.896120722652
Replicate 21.6222639380526
Replicate 31.5730569012483
Condition 2: 8 Hour
Replicate 12.5715911853013
Replicate 22.8951804121999
Replicate 32.7585214547623
Condition 3: 24 Hour
Replicate 11.9917393770836
Replicate 21.666456733555
Replicate 31.9287445721559


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_87216.p1 GENE.S_Transcript_87216~~S_Transcript_87216.p1 ORF type:complete len:340 (+),score=52.22,UPF0565|PF10561.5|33,UPF0565|PF10561.5|3e-10 S_Transcript_87216:673-1692(+)
ATGAATAAAAGAACTAATTTCTCCACAAAAAAAAAAAATCCCCAAACCCGTATCCCTTTTCGGGTCGACCCAAGAATGGACCGTTGCACAGGTATCTTGAAAGTTCCTGTATACCCAAATGGCAATACTCTCTGTAGAGTAGCTGCATCTCTTTGCGTTTCTCCTTCATCAAAATCCCTTCTTTTGCCTACTGCTAATGCAATATTCTTTAATGGAGACAAGGTTGAAGGAACTGGTAACCCAGTTATTGAAAGATTGTCTGATTTACAAAACATAGCCAAGATTCTAGTCTCCAAATTTGGTGCTTCGATCAATGCTTGGGTTATTGAAGCTCCAATCTTTAATGGGCCTTTTGCTGTTTATAAGGAATTTCTTCCTTCTCTTAGTAACTGGGGTGAACCCCATTCTTATAAACATGATGGGTTTCCTGCATCGACTTCTGTTGTTTCACTTCTTTCAAGTTTTCTTCATGAGAGAGCGGAAAATTCTACCCAGGAGGAACATCACCACCCTACACCATCTGTATCCACTTGTTTCCCCAGAACTTTTATACTCGGTTTTAGCAAGGTTGGTGTAGTGCTGAATCAGTTAGTCACTGAGCTTGGCTTTGTGGACATAACACGCATGGAGGATCCAGCACAAGCTGACCTGCAGAACCAGATTATACCCGGGTCAAGAGAGAGCTTCTTGGGCAGCATAACTGAGATTCACTATGTCGATGTTGGGTTGAATACCCCTGGTGCTTACCTCACTGACCATAATGTTATCGAGAGAATAGCTGGCCGGCTGATACAGAGGGATGGTCACTTGTGTTTCATGCTTCACGGGACCCCAAGGCAGTGGAACGACAAGCGGCGGGCCTGGATACGTGATGAAAAGGACCAGTTCCGTCAATTGCTTGAAGCCGAAAGGCAGAAGAGTATGGGGAAGCTCCAAGTCTATGAGAGAGTATATTTTGCTGATAAGACTCCTGATATGCAGATGCATTTTGGCATAATCGAAGAATTTCTTATACATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_87216.p1 GENE.S_Transcript_87216~~S_Transcript_87216.p1 ORF type:complete len:340 (+),score=52.22,UPF0565|PF10561.5|33,UPF0565|PF10561.5|3e-10 S_Transcript_87216:673-1692(+)
MNKRTNFSTKKKNPQTRIPFRVDPRMDRCTGILKVPVYPNGNTLCRVAASLCVSPSSKSLLLPTANAIFFNGDKVEGTGNPVIERLSDLQNIAKILVSKFGASINAWVIEAPIFNGPFAVYKEFLPSLSNWGEPHSYKHDGFPASTSVVSLLSSFLHERAENSTQEEHHHPTPSVSTCFPRTFILGFSKVGVVLNQLVTELGFVDITRMEDPAQADLQNQIIPGSRESFLGSITEIHYVDVGLNTPGAYLTDHNVIERIAGRLIQRDGHLCFMLHGTPRQWNDKRRAWIRDEKDQFRQLLEAERQKSMGKLQVYERVYFADKTPDMQMHFGIIEEFLIH*

Click here to download the sequence:
Link to NCBI Protein BLAST