Transcript Information: S_Transcript_87240.p1


Annotated TAIR IDAT1G80630.1
Annotated Gene NameRNI-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:30308879-30310615 | Reverse length=578
E-Value6.5E-135
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.2546942011614
Replicate 210.229805538778
Replicate 310.242419174456
Condition 2: 8 Hour
Replicate 113.171564607641
Replicate 214.127551476644
Replicate 314.198272193629
Condition 3: 24 Hour
Replicate 113.152282793645
Replicate 212.116120721611
Replicate 310.647368226381


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_87240.p1 GENE.S_Transcript_87240~~S_Transcript_87240.p1 ORF type:complete len:578 (+),score=107.14,LRR_4|PF12799.3|7e+02,LRR_4|PF12799.3|1.3,LRR_4|PF12799.3|9e+02,LRR_4|PF12799.3|0.93,LRR_4|PF12799.3|11,LRR_4|PF12799.3|5e+03,LRR_4|PF12799.3|4e+02,LRR_4|PF12799.3|10,LRR_4|PF12799.3|50,LRR_4|PF12799.3|1.6e+03 S_Transcript_87240:337-2070(+)
ATGCCGGAAAGATGTGTTGATGTACCAGAAGAAATCTGGGAACAAATCATTTCACTGCTAGATCATGACCGTTACTTAGAACCTTTATCAATTGTTTCAAAAAGGTTTCTTTCAATCACTAATAGGTTTAAATCAACATTAATAATCTCTGATCCAACACCCCATTTCCTTCCCAAGCTTTTTCATAGATTCCCAAACTTAAAGCACATATCTTTTAGCGATTTTCATGGTTCACCCACTACAATTCTTCACCAAATCTCTCAAACCCATTTCCCACTTGAGTCACTTGACCTTTCTAACCTCAAGGTTTTCCCTGAAGCAATCCAAGCGTTGCCCACTTCATCTTTAAGCTCTATTAAGTCACTCAAGTTGTCTAATCTTTCTGTTATTAATGATGTTGATTTGGGTGTGATTTGTCATTTGATGGGTAATTTAGAGGAATTAGATCTTTGTGATCCTAAGGATGATTATAGTGAACTTGGAGATATGGATATTGATATGTCTGGTGGTGGAGGTTTGGGGATTACTGATGAAGGTATTGATTTGCTTGCTTCTGGTCTTTGTCACTTAAGGAAGGTTAATTTGTCAGGAAATTACTTGATTTCTGATAAGTCTGTTATGTCACTTTCTGAGAAATGCTTGAATTTGGAGGAGATTGTAGTGAAGAATTGCACTTTTGTTACTCAGAATGGTGTTAGTTTCGCTTTTCAAACTTGTGCCAATTTGAGATCAATAACACTCCTTGGAATGGAGTTGGTTGCTCAGGAAGTTAGTGAATCCCTTGCTTGTGCTAGGAACTTGTCTGTCATTGATTTTTCGTATATGAGTGTTTCGGATGGATTGCTCTTTGCTATTGCCAAAGCTTCCATTCCTTTGAAGAAGGTCACTTTGTACCATTGCAAGGACTTTAAGTTTTCTGGTATTTTGTCACTCTTGCATACATACCAGTCCCTTGAATACTTTGCCCTGGAAGGGGTGTACTGGCTCAATGATGTATCCATCATTGATATATCAAAGTTTCTTCGTAAAGCTAACACTGTCAAGCTTAACTTCTGCTCAAGGTTGACTAGTTCTGCTTTCTTTACCTTGCTCAAGAATTGCCCTTCTTTAAGTTGTCTGGAAATGGAGAAAACAGACATGGGGAAGCAAGAATTTGCTGTAACTAATTCCAACAATGCGCAGATTAGAGCTTTGAATTTGTGTTCGAACAAGTCCTTGAGCAATGAATGTCTAGAAAAGATTGCGTCGTCCTGTCCAAGTCTAGAGCTACTAGATGTCAGTGAGTGTCCAGCCATCACAAGGAAGGGTATTGGAGAAATCCTGAGGTGCTGCTCTTGGTTAAGGCATTTACAGATGAGTGGATGTGGGCAAATCAAGAGTCTGGGTATGGATGCAAAACTTCGGAAATTCGAGACATTGCGAGCATCAAGCTCGGGTCTCAATGATGATGCACTCGTAATGATTGCAAAAAAGTGTCCTGCCCTTATGTTTTTGGATGTGATGGGTTGCTCTGGAGTAACTTCCCGAGGAGTACAAGAAGTCGTTAAGCATTGTCGAAGGTTGAGGGAAATCAATTTGAATTGGATTCGTGGTATGGGCCGTGACATTGTAGCTTGGATGGTGTTTACAAGACCTTCACTGAGGAAGATAATCCCCCCATATGGATGGGTAGCCACCGAAAATGAGAAAGGCTTGTTCCTACGCCATGGATGTCAGGTTTGTGAAGAAGCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_87240.p1 GENE.S_Transcript_87240~~S_Transcript_87240.p1 ORF type:complete len:578 (+),score=107.14,LRR_4|PF12799.3|7e+02,LRR_4|PF12799.3|1.3,LRR_4|PF12799.3|9e+02,LRR_4|PF12799.3|0.93,LRR_4|PF12799.3|11,LRR_4|PF12799.3|5e+03,LRR_4|PF12799.3|4e+02,LRR_4|PF12799.3|10,LRR_4|PF12799.3|50,LRR_4|PF12799.3|1.6e+03 S_Transcript_87240:337-2070(+)
MPERCVDVPEEIWEQIISLLDHDRYLEPLSIVSKRFLSITNRFKSTLIISDPTPHFLPKLFHRFPNLKHISFSDFHGSPTTILHQISQTHFPLESLDLSNLKVFPEAIQALPTSSLSSIKSLKLSNLSVINDVDLGVICHLMGNLEELDLCDPKDDYSELGDMDIDMSGGGGLGITDEGIDLLASGLCHLRKVNLSGNYLISDKSVMSLSEKCLNLEEIVVKNCTFVTQNGVSFAFQTCANLRSITLLGMELVAQEVSESLACARNLSVIDFSYMSVSDGLLFAIAKASIPLKKVTLYHCKDFKFSGILSLLHTYQSLEYFALEGVYWLNDVSIIDISKFLRKANTVKLNFCSRLTSSAFFTLLKNCPSLSCLEMEKTDMGKQEFAVTNSNNAQIRALNLCSNKSLSNECLEKIASSCPSLELLDVSECPAITRKGIGEILRCCSWLRHLQMSGCGQIKSLGMDAKLRKFETLRASSSGLNDDALVMIAKKCPALMFLDVMGCSGVTSRGVQEVVKHCRRLREINLNWIRGMGRDIVAWMVFTRPSLRKIIPPYGWVATENEKGLFLRHGCQVCEEA*

Click here to download the sequence:
Link to NCBI Protein BLAST