Transcript Information: S_Transcript_87260.p1


Annotated TAIR IDAT3G21000.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7363921-7365138 | Forward length=405
E-Value1E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.29138322520271
Replicate 20.40260564885976
Replicate 30.067309255779564
Condition 2: 8 Hour
Replicate 10.70046902501532
Replicate 20.24494724788022
Replicate 30.31118025700703
Condition 3: 24 Hour
Replicate 10.55808096508817
Replicate 20.24814392236877
Replicate 30.092051256952979


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_87260.p1 GENE.S_Transcript_87260~~S_Transcript_87260.p1 ORF type:3prime_partial len:274 (+),score=24.77 S_Transcript_87260:1298-2116(+)
ATGGGTTCTTTACAAGCCCATGAAGACAGAATGAAAAGATTTTCAGAGCAGCCACTTGAACAAGCCTTTCAGGCTAAAATAAAATTTTCGAACATAGAAAATAAAAATCAATATAGCCACGGTAAAAATTTTCAATCAAAAAGGGGACAATCTAATAACCGTGGCAGGGGGAGAGGAACTTATAAAAATCAAGGAGACAGAGAAAATAGTCAATCTAGTCCATATTGTAAATTGTGCAAGAAAAATGGCCATGACACAAAAGATTGTCGGTACAAGTGTAAAAGATGCAAAAACCATATGCACTTTGAAAAAGATTGTTGGTTCCGGCAAAAAGAGCAGGCCAATTTTTTAGAGAAAAATGAAACTAGTGACCAATTATTTTATTCATGTCTAAACACTCACCAAGAGTCATCCGACATTTGGTATTTAGATAGTGGTTGTTCAAACCACATGACGGGTGATAAAAATTCATTTGTTAAACTTGATGAAAATGTTAAATCTCAAATAACTCTTGGTGATGGAAGATCTCAAGATGTAGCAGGTAAAGGGACAATTGCAGTGAAAACTAAACATGGCACATCTAAATTTATCCATGATGTTTTATATGTCCCTGGCCTAGCTCAAAACCTGCTAAGTGTGGGTCAACTTGTTCAAAGAGGCTATATGGTGAAATTTGATCAAAATAAATGCCTCATATATGATAAGAAAAATGGTCAATTGATCACCTCAGTGAACATGGCCTCAAACAAAATATTTCCATTAAAAATGCCAATTGAGAGCAAAGTTGCTCTTAATTGTATCAATGATGAATCAATACTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_87260.p1 GENE.S_Transcript_87260~~S_Transcript_87260.p1 ORF type:3prime_partial len:274 (+),score=24.77 S_Transcript_87260:1298-2116(+)
MGSLQAHEDRMKRFSEQPLEQAFQAKIKFSNIENKNQYSHGKNFQSKRGQSNNRGRGRGTYKNQGDRENSQSSPYCKLCKKNGHDTKDCRYKCKRCKNHMHFEKDCWFRQKEQANFLEKNETSDQLFYSCLNTHQESSDIWYLDSGCSNHMTGDKNSFVKLDENVKSQITLGDGRSQDVAGKGTIAVKTKHGTSKFIHDVLYVPGLAQNLLSVGQLVQRGYMVKFDQNKCLIYDKKNGQLITSVNMASNKIFPLKMPIESKVALNCINDESIL

Click here to download the sequence:
Link to NCBI Protein BLAST