Transcript Information: S_Transcript_87260.p2


Annotated TAIR IDAT1G48720.1
Annotated Gene Nameunknown protein; Has 229 Blast hits to 229 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 228; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:18018148-18018441 | Forward length=97
E-Value3E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.73516577997736
Replicate 20.73136318975187
Replicate 30.81514855618124
Condition 2: 8 Hour
Replicate 11.2960181960689
Replicate 20.86520961590103
Replicate 31.0599040245571
Condition 3: 24 Hour
Replicate 11.0862096763279
Replicate 21.252144285986
Replicate 30.97543818141333


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_87260.p2 GENE.S_Transcript_87260~~S_Transcript_87260.p2 ORF type:complete len:181 (+),score=18.84,UBN2|PF14223.2|4.6e+02,UBN2|PF14223.2|5.4e-20,DUF4219|PF13961.2|3e-07,UBN2_3|PF14244.2|6.4e-06 S_Transcript_87260:694-1236(+)
ATGGCCACATCAACCTCAAACACTATTTTCAATTATGCCCCAAATAATTGGGTTCCAATATTCAATGGGGAGCACTTTGAATATTGGAGTATTCAAATGAGGACTCTGTTAACATCACAGGGCCTCTGGGATTTGGTACAAAATGGGTACCAACAACCCAAAGATGCTAGTGAATTAGCATCTTGGGATGAAAATGCTAAAAAGCAATATGAAGAAAATCAAAGAAAAGACCAGTGTGCATTGTCCTATATTCATCGGGGTGTCGATATGACAATATTTCCCCGCATCATGGCCGCCACAACGGCTAGGGAGGCTTGGAAAATTTTACAAAATGAGTTCAAGGGCTCCAACAAGGTAATCACTATCAAACTTCAATCTCTTTGGAAAGATTTTGATAATTTACAAATGACAGAAGGTGAAACAATACAGACATTCTTCGGTCGTGTTACAATAATTGTAAATCAAATACGCAGTTATGGAGACACGATCGAAGATGTCAAAATAATACAAAAAAATATTAAGAAGCCTTCTGTCAAAATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_87260.p2 GENE.S_Transcript_87260~~S_Transcript_87260.p2 ORF type:complete len:181 (+),score=18.84,UBN2|PF14223.2|4.6e+02,UBN2|PF14223.2|5.4e-20,DUF4219|PF13961.2|3e-07,UBN2_3|PF14244.2|6.4e-06 S_Transcript_87260:694-1236(+)
MATSTSNTIFNYAPNNWVPIFNGEHFEYWSIQMRTLLTSQGLWDLVQNGYQQPKDASELASWDENAKKQYEENQRKDQCALSYIHRGVDMTIFPRIMAATTAREAWKILQNEFKGSNKVITIKLQSLWKDFDNLQMTEGETIQTFFGRVTIIVNQIRSYGDTIEDVKIIQKNIKKPSVKI*

Click here to download the sequence:
Link to NCBI Protein BLAST