Transcript Information: S_Transcript_87267.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value5E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.26091177681549
Replicate 20
Replicate 30.18081113807451
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.20897889808805
Condition 3: 24 Hour
Replicate 10.64249657325277
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_87267.p1 GENE.S_Transcript_87267~~S_Transcript_87267.p1 ORF type:3prime_partial len:102 (+),score=11.22 S_Transcript_87267:134-436(+)
ATGGTTATTGGACTCCCTAATATAAATAATGAAAGGAAAATATGTGAGGGTTGCATATATGGAAAAATGCATAGATTACCGTTTCCCACATCTTCTTGGAGGGCCAAAGCTCCATTAGAACTCGTTCATGCAGATATTGGGGCCCATCCAAGAGTCCCTCTATTGTTTGTTGATGATTATTCTCGTATGATGTGGGTTTATTTCTTAAATAACAAATCAGAGGCATTCTCCTTCTTTTTACAATTCAAAGCCCTGACAGAGAAACAAAGTGGACATTCTCTTAAAATTCTTAGAACAGATCGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_87267.p1 GENE.S_Transcript_87267~~S_Transcript_87267.p1 ORF type:3prime_partial len:102 (+),score=11.22 S_Transcript_87267:134-436(+)
MVIGLPNINNERKICEGCIYGKMHRLPFPTSSWRAKAPLELVHADIGAHPRVPLLFVDDYSRMMWVYFLNNKSEAFSFFLQFKALTEKQSGHSLKILRTDR

Click here to download the sequence:
Link to NCBI Protein BLAST