Transcript Information: S_Transcript_87280.p1


Annotated TAIR IDAT3G61790.1
Annotated Gene NameProtein with RING/U-box and TRAF-like domains
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:22871974-22873543 | Reverse length=326
E-Value1.1E-128
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.848863421239
Replicate 218.20180138495
Replicate 316.59846247524
Condition 2: 8 Hour
Replicate 114.483494257053
Replicate 215.007781795817
Replicate 314.47701316505
Condition 3: 24 Hour
Replicate 113.471011485866
Replicate 216.053533199913
Replicate 320.177635524093


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_87280.p1 GENE.S_Transcript_87280~~S_Transcript_87280.p1 ORF type:3prime_partial len:240 (+),score=26.45,Sina|PF03145.12|1.3e+04,Sina|PF03145.12|8.2e-51 S_Transcript_87280:748-1464(+)
ATGGCTACTGGAAGTCCATATATTGATGATATGAGAAGCAAGTCTGAAGTTATTGATCCTCCCTCGTGTGAAGACATGATGGATATATGTGAACATGTGAACGATTCAGCGCAAAGTGTTGTCAAACCTAATATGACCGTTTCTAGTAGCGTCCATGAACTGCTGGAGTGCCCAGTATGCTTAACAGCCATGTATCCTCCTATCCACCAGTGCTCAAACGGGCACACTATTTGTTCTACTTGCAAGCCCAGGGTACACAACCGATGTCCAACTTGCAGGCATGAACTAGGAAATATCAGATGCCTCGCCTTAGAAAAGGTGGCTGCATCCCTTGAGCTCCCATGTAAATATCAAAGTTTTGGATGTGTGGGCATATATCCTTACTACAGCAAACTGAAGCATGAATCCCAGTGTACATTTAGACCCTACAACTGTCCTTATGCTGGATCAGAATGTGCCTGCATTGGCGACATCCCATATTTGGTGGCGCACCTTAAGGATGATCATAAAGTCGATATGCACATTGGAAGTACATTCAACCATCGATATGTCAAGTCAAATCCTCATGAGGTTGAAAATGCCACTTGGATGCTTACGGTCTTTAGCTGCTATGGGCAGTACTTCTGCCTTCATTTTGAAGCATTCCAACTTGGTATGGCTCCTGTCTACATGGCTTTCTTACGGTTTATGGGAGATGATAACGAGGCAAAGAATTAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_87280.p1 GENE.S_Transcript_87280~~S_Transcript_87280.p1 ORF type:3prime_partial len:240 (+),score=26.45,Sina|PF03145.12|1.3e+04,Sina|PF03145.12|8.2e-51 S_Transcript_87280:748-1464(+)
MATGSPYIDDMRSKSEVIDPPSCEDMMDICEHVNDSAQSVVKPNMTVSSSVHELLECPVCLTAMYPPIHQCSNGHTICSTCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQSFGCVGIYPYYSKLKHESQCTFRPYNCPYAGSECACIGDIPYLVAHLKDDHKVDMHIGSTFNHRYVKSNPHEVENATWMLTVFSCYGQYFCLHFEAFQLGMAPVYMAFLRFMGDDNEAKNY

Click here to download the sequence:
Link to NCBI Protein BLAST