Transcript Information: S_Transcript_87330.p1


Annotated TAIR IDAT3G26540.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:9744542-9746644 | Reverse length=700
E-Value4.6E-253
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.6629617548821
Replicate 23.3942753165407
Replicate 35.0178954301534
Condition 2: 8 Hour
Replicate 17.0173292923899
Replicate 28.3177385968214
Replicate 37.7733005511043
Condition 3: 24 Hour
Replicate 14.0142307269041
Replicate 25.2301103637725
Replicate 34.6707489639104


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_87330.p1 GENE.S_Transcript_87330~~S_Transcript_87330.p1 ORF type:complete len:702 (+),score=100.78,PPR_2|PF13041.2|9.4e+02,PPR_2|PF13041.2|0.52,PPR_2|PF13041.2|6.8e-07,PPR_2|PF13041.2|1.2e+04,PPR_2|PF13041.2|0.0037,PPR_2|PF13041.2|2.8,PPR_2|PF13041.2|3.4e-06,PPR_2|PF13041.2|0.00035,PPR_2|PF13041.2|9.5,PPR_2|PF13041.2|8e-07,PPR_2|PF13041.2|15,PPR_2|PF13041.2|4.7e-14,PPR_2|PF13041.2|7.4e+02,PPR|PF01535.16|1.4e+02,PPR|PF01535.16|8.9e+03,PPR|PF01535.16|0.0066,PPR|PF01535.16|0.018,PPR|PF01535.16|14,PPR|PF01535.16|0.0093,PPR|PF01535.16|0.07,PPR|PF01535.16|1.1e-07,PPR|PF01535.16|0.0019,PPR|PF01535.16|0.49,PPR|PF01535.16|0.00024,PPR|PF01535.16|3.7,PPR|PF01535.16|1.5e-09,PPR|PF01535.16|4.9,PPR|PF01535.16|33,PPR_3|PF13812.2|0.79,PPR_3|PF13812.2|53,PPR_3|PF13812.2|1.4e+04,PPR_3|PF13812.2|7.7e+02,PPR_3|PF13812.2|7.8,PPR_3|PF13812.2|0.0016,PPR_3|PF13812.2|2.3,PPR_3|PF13812.2|14,PPR_3|PF13812.2|0.00094,PPR_3|PF13812.2|2.7e+03,PPR_3|PF13812.2|0.004,PPR_3|PF13812.2|4.1e+03,PPR_3|PF13812.2|59,PPR_3|PF13812.2|4.1e+03,PPR_1|PF12854.3|6.2e+02,PPR_1|PF12854.3|0.06,PPR_1|PF12854.3|5.2e+02,PPR_1|PF12854.3|4.1e+03,PPR_1|PF12854.3|2.5e+03,PPR_1|PF12854.3|62,PPR_1|PF12854.3|22,PPR_1|PF12854.3|1.5e-06,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|1.1e+03,PPR_1|PF12854.3|1.9,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|9.3e-05,PPR_1|PF12854.3|1 S_Transcript_87330:214-2319(+)
ATGGGTGTGAATGGTCCATCCTCTGCTCTCCAACACCTTCTAAAATCCAACACAATCTTTGACAAATCATCCCTTCCTACCACCACAGAATCCGTAACAAAAACCATCCATTCTCTCATACAATCAGGCCATCTAAAGAAAGCAGTTTCTCTCCTCTTTTCATCACCATTCCCCTTCACTTTCCCTCTATACTCCAAGCTCTTCAACCGCTGTTCTTCTCATCGGGCCGTTATCGAGGCCCGAAAACTCGAGTCCCACCTCATCACTTACTATGACCCCCCACCCACCTTTTTGCTCAACAGGGCAATCGAGACTTATGCTAAATGTGGGTGTTTACGTGATGCCCGTGAACTGTTCGACGAAATGCCTCAGAGAGATGGAGGCACTTGGAATTCCATGATCACTGCGTACGTCCACGGTTGCCCCAATGAGGCTCTGGTGCTTTTTCTTGAGATGGGTCGGTCTGCGGTGGATCCGAGTGCGGTCACCTTCGCGAGTGTTTTGGGTTGTTGTGCTGGTTTGCTTGAGTTGGGGTTCTTGAGGGCGGTCCATGGGCTTGTAGTGAAATATGGGATAAGTGGGAATGTGATCTTGGGAAGCTCTCTTGTTGATATATATGGGAAATGTGGTGTTATTGGTGATTCTAGGAAGATGTTTGATAGGATTAAGAGTCCGAATGATGTGTCGTGGAATGTGGTTGTGAGGAGGTATCTTGAGGCCGGGGATTGTAGAGAGGCTGTTTCTATGTTTTTCCGGGCTCTTAGAGGTGGTGTTATTCCATTGACACATACATTTGCAAGTGCTCTCGTTGCGTGTTCTGGGATGCTTGCTTTTAAGGAGGGAACTCAAATTCATGATGTTGCCATTAAGATTAATTATGAGGAAGATGAGATGATTGCTACCTCGCTCATTGATATGTACGTCAAATGTGGTGATTTAGTGAGTGCTAGGAAGATTTTTGATATGCCGAGTGATAAGGATTTGATCTTATGGACTACTATGGTGTCAGGGTATGCATCAGCAGGAAGAATTGAAAAAGCTAGAGAGCTTTTTGATGACATGCCTGAGCGGAGCATTGTGTCCTGTAATGCAATGCTGGCAGGGTATGTGCACTCTGGCCAATGGGAGGAAGCCCTACGTTTTATATTTCTCTTGAGTAAGGATTTAAGTAAAATCGACCATATCACTCTTAATTTAATCTTGAATGTGTCGGCTGTCCTTTCTGATGTCGAATTGGGGAAGCAAGTTCATTGTCGTATTTACAGAGTCGGACTTTACTCTGATGTGTACATCGGTAATTCCCTTCTTGACATGTATGGTAAATGTGGGACGTTTAGAAGTGCTAGAATTTGTTTTTGCCAGATGAGAGGTTGGAGGGACAGTATATCTTGGAACTCTTTATTGAGTGCCTTTGCACGACGTCAAATGAGTGAAGAGGTCATGAGATTGTTCCCAGAGATGCTTCAGGAAACAATTCCAAATGAACATACGTTAGCAATCCTTTTTGCAGTGTGTGCTAACTTATTTGCACTCCAACAAGGAAAAGAGATCCATGGTTTTATGATAAGGAATGGGTATGATATAGATGTGGTTCTTCTGGGTGCAATGCTCGACATGTACTCAAAATGCAGGCATCTTGATTACGCACTTAAAGTCTTCATAATTGCTCGCACAGGGGATGTGATTCTTTGGAACTCTATGATTATGGGATGTTGTCACCATGGTCTGACATCTGAGGCTCTTGCATTGTTTGAGTTGATGAAAGAGGATGGGGTTGAACCTGACCATGTCACTTTCCAAGCAGTTTTAAATGCTTGTATTTGTGGGGGCTATGTTGATCGTGGAAAGCGATATTTTGATGCAATGAGTAATGAGTATTTTGTCATGGCGAGGTTAGAGCATTATGAGTGTATGATTGAACTTTACAGTAGACATGGAGCAATGGAAGAGCTTAAGAATTTTATCGGGAGATTGCCATGTGACCCTACTGTCTCCATGTTGACAAGAGTCCTTGATGCTTGTAGACAATATGGTAACTCAAGGTTGGAAAAGTGGGCTACTAAACAATTGAATAAGCTATCCAAAGGAAAAAATCAATTGTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_87330.p1 GENE.S_Transcript_87330~~S_Transcript_87330.p1 ORF type:complete len:702 (+),score=100.78,PPR_2|PF13041.2|9.4e+02,PPR_2|PF13041.2|0.52,PPR_2|PF13041.2|6.8e-07,PPR_2|PF13041.2|1.2e+04,PPR_2|PF13041.2|0.0037,PPR_2|PF13041.2|2.8,PPR_2|PF13041.2|3.4e-06,PPR_2|PF13041.2|0.00035,PPR_2|PF13041.2|9.5,PPR_2|PF13041.2|8e-07,PPR_2|PF13041.2|15,PPR_2|PF13041.2|4.7e-14,PPR_2|PF13041.2|7.4e+02,PPR|PF01535.16|1.4e+02,PPR|PF01535.16|8.9e+03,PPR|PF01535.16|0.0066,PPR|PF01535.16|0.018,PPR|PF01535.16|14,PPR|PF01535.16|0.0093,PPR|PF01535.16|0.07,PPR|PF01535.16|1.1e-07,PPR|PF01535.16|0.0019,PPR|PF01535.16|0.49,PPR|PF01535.16|0.00024,PPR|PF01535.16|3.7,PPR|PF01535.16|1.5e-09,PPR|PF01535.16|4.9,PPR|PF01535.16|33,PPR_3|PF13812.2|0.79,PPR_3|PF13812.2|53,PPR_3|PF13812.2|1.4e+04,PPR_3|PF13812.2|7.7e+02,PPR_3|PF13812.2|7.8,PPR_3|PF13812.2|0.0016,PPR_3|PF13812.2|2.3,PPR_3|PF13812.2|14,PPR_3|PF13812.2|0.00094,PPR_3|PF13812.2|2.7e+03,PPR_3|PF13812.2|0.004,PPR_3|PF13812.2|4.1e+03,PPR_3|PF13812.2|59,PPR_3|PF13812.2|4.1e+03,PPR_1|PF12854.3|6.2e+02,PPR_1|PF12854.3|0.06,PPR_1|PF12854.3|5.2e+02,PPR_1|PF12854.3|4.1e+03,PPR_1|PF12854.3|2.5e+03,PPR_1|PF12854.3|62,PPR_1|PF12854.3|22,PPR_1|PF12854.3|1.5e-06,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|1.1e+03,PPR_1|PF12854.3|1.9,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|9.3e-05,PPR_1|PF12854.3|1 S_Transcript_87330:214-2319(+)
MGVNGPSSALQHLLKSNTIFDKSSLPTTTESVTKTIHSLIQSGHLKKAVSLLFSSPFPFTFPLYSKLFNRCSSHRAVIEARKLESHLITYYDPPPTFLLNRAIETYAKCGCLRDARELFDEMPQRDGGTWNSMITAYVHGCPNEALVLFLEMGRSAVDPSAVTFASVLGCCAGLLELGFLRAVHGLVVKYGISGNVILGSSLVDIYGKCGVIGDSRKMFDRIKSPNDVSWNVVVRRYLEAGDCREAVSMFFRALRGGVIPLTHTFASALVACSGMLAFKEGTQIHDVAIKINYEEDEMIATSLIDMYVKCGDLVSARKIFDMPSDKDLILWTTMVSGYASAGRIEKARELFDDMPERSIVSCNAMLAGYVHSGQWEEALRFIFLLSKDLSKIDHITLNLILNVSAVLSDVELGKQVHCRIYRVGLYSDVYIGNSLLDMYGKCGTFRSARICFCQMRGWRDSISWNSLLSAFARRQMSEEVMRLFPEMLQETIPNEHTLAILFAVCANLFALQQGKEIHGFMIRNGYDIDVVLLGAMLDMYSKCRHLDYALKVFIIARTGDVILWNSMIMGCCHHGLTSEALALFELMKEDGVEPDHVTFQAVLNACICGGYVDRGKRYFDAMSNEYFVMARLEHYECMIELYSRHGAMEELKNFIGRLPCDPTVSMLTRVLDACRQYGNSRLEKWATKQLNKLSKGKNQLS*

Click here to download the sequence:
Link to NCBI Protein BLAST