Transcript Information: S_Transcript_87342.p1


Annotated TAIR IDAT4G36680.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:17292479-17293717 | Reverse length=412
E-Value3.2E-167
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5051269919506
Replicate 23.2825125927034
Replicate 33.0138129697591
Condition 2: 8 Hour
Replicate 15.3573541528407
Replicate 25.4565484487138
Replicate 35.7708758150071
Condition 3: 24 Hour
Replicate 11.5984061090679
Replicate 22.0452708007923
Replicate 32.2146185331322


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_87342.p1 GENE.S_Transcript_87342~~S_Transcript_87342.p1 ORF type:complete len:410 (+),score=81.41,PPR_2|PF13041.2|2.5e-05,PPR_2|PF13041.2|1.4e-08,PPR_2|PF13041.2|4.3e-08,PPR_2|PF13041.2|4.8e-10,PPR_2|PF13041.2|4.1e-05,PPR_2|PF13041.2|1.6e-14,PPR_2|PF13041.2|22,PPR|PF01535.16|8.3e+03,PPR|PF01535.16|0.0005,PPR|PF01535.16|0.026,PPR|PF01535.16|1.7e-07,PPR|PF01535.16|0.00013,PPR|PF01535.16|1.4e+02,PPR|PF01535.16|1.9e-08,PPR|PF01535.16|0.27,PPR|PF01535.16|4.5e+02,PPR_1|PF12854.3|0.23,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|1.2e-08,PPR_1|PF12854.3|0.0077,PPR_1|PF12854.3|17,PPR_1|PF12854.3|7.1e-11,PPR_1|PF12854.3|0.021,PPR_1|PF12854.3|7.8e+02,PPR_3|PF13812.2|3.3e+03,PPR_3|PF13812.2|0.75,PPR_3|PF13812.2|0.016,PPR_3|PF13812.2|5.8e-06,PPR_3|PF13812.2|1.9e-05,PPR_3|PF13812.2|3.3e+02,PPR_3|PF13812.2|8.8e-06,PPR_3|PF13812.2|3e+02,TPR_14|PF13428.2|3.1e+03,TPR_14|PF13428.2|90,TPR_14|PF13428.2|15,TPR_14|PF13428.2|1.2e+02,TPR_14|PF13428.2|6.1e+03,TPR_14|PF13428.2|21,TPR_14|PF13428.2|1.6e+02,ATP13|PF12921.3|6.4e+02,ATP13|PF12921.3|22,ATP13|PF12921.3|1.4e+02,ATP13|PF12921.3|13,ATP13|PF12921.3|1.2e+02,ATP13|PF12921.3|22 S_Transcript_87342:146-1375(+)
ATGACATCTTCCATCTCCATTCGCCTGGTTCGTCGTCTCTGCACCACCTCATCATCATCATCAACAACAAAACCAGACATTTCAATCTCAAGAGCCAAATCCAAGCTCCGTTCTGAATTCGACCCAGACAAGGCCTTACAAATCTACTCCTCTGTTTCCAACCGTTACACCTCCCCTGTCTCGGCTCGCTATGCTCAAGAACTCACCGTTCAACGTCTCGCCAAAGCGCATCGTTTTGATGACATTGTATCCTTCCTTGAGTCCCACAAAAAGGACCCTAAGATCACTCAAGAGCCCTTCCTTTGTACCATTATCCGATCTTATGGCCGTGCAGGTATGTTCGATCATGCCCTTCAAACTTACAACCAAATGGATGAGCTGGGTACCCCCAGATCAACTGTTTCTTTCAATGCTTTGCTTGCTGCATGTAATCATTCTAGGCTTTTCGATAGAGTCCCCCAAATGTTCGATGAAATGTCCCAAAGACACGGGCTTGTCCCCGATAAGATCTCTTACGGGACATTGGTTAAGGCTCACTGCGAGATGGGCTTTCCCGATAAAGCTTTGAAGGTTTTGGACGAGATGGAAGAGAAGGGTGTTGAGGTTACTGCTGTGGTTTACACTTCCATTTTGGATGCTATGTATAAGACGGGGGACAACGATGCGGCGGAGCGGATTTGGGATGATATGGTTAAAAAGGGCTGTTCTCCTGATGTGGCTATGTTTAATGTTAAGATTTCTCATGTGGCTGGTGGTGAGCCTGAGGATGTCAAGGGTTTGATTGAAGATATGACTGCCATGGGATTGAAACCTGATACGATTAGTTATAATTATTTGTTGACCAGTTATTGTAGGAATGGGAGAATGGAGGAAGCTGTGAAGCTTTACGAGGAGTTGGAGGCGAGTGGGTTTAGGCCGAAGGCTGCAACTTTCAGGACTTTGATACATTATCTATGTAAGAATGACGATTTTGTTAAAGGTTATGATGTGTTCAAGAGGAGTGTTTTTCACCACAAGATCCCTGATGTTGCTACCTTGAAGGTTTTGGTGGAAGGATTAGTGGCAAAGAAACAGTTTAAGGATGCCAAGGGGTTGATTCGAACAGTTAAGAAGAGGTTCCCATCTAATATGCTAAATGCTTGGAACAAAGTTGAGTCAGAACTTGGTTTGGGTTCGAAAGAATCTTCTCCTGATGATAACTCAGAAGAGTCTCAGGAGGCAGTAGCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_87342.p1 GENE.S_Transcript_87342~~S_Transcript_87342.p1 ORF type:complete len:410 (+),score=81.41,PPR_2|PF13041.2|2.5e-05,PPR_2|PF13041.2|1.4e-08,PPR_2|PF13041.2|4.3e-08,PPR_2|PF13041.2|4.8e-10,PPR_2|PF13041.2|4.1e-05,PPR_2|PF13041.2|1.6e-14,PPR_2|PF13041.2|22,PPR|PF01535.16|8.3e+03,PPR|PF01535.16|0.0005,PPR|PF01535.16|0.026,PPR|PF01535.16|1.7e-07,PPR|PF01535.16|0.00013,PPR|PF01535.16|1.4e+02,PPR|PF01535.16|1.9e-08,PPR|PF01535.16|0.27,PPR|PF01535.16|4.5e+02,PPR_1|PF12854.3|0.23,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|1.2e-08,PPR_1|PF12854.3|0.0077,PPR_1|PF12854.3|17,PPR_1|PF12854.3|7.1e-11,PPR_1|PF12854.3|0.021,PPR_1|PF12854.3|7.8e+02,PPR_3|PF13812.2|3.3e+03,PPR_3|PF13812.2|0.75,PPR_3|PF13812.2|0.016,PPR_3|PF13812.2|5.8e-06,PPR_3|PF13812.2|1.9e-05,PPR_3|PF13812.2|3.3e+02,PPR_3|PF13812.2|8.8e-06,PPR_3|PF13812.2|3e+02,TPR_14|PF13428.2|3.1e+03,TPR_14|PF13428.2|90,TPR_14|PF13428.2|15,TPR_14|PF13428.2|1.2e+02,TPR_14|PF13428.2|6.1e+03,TPR_14|PF13428.2|21,TPR_14|PF13428.2|1.6e+02,ATP13|PF12921.3|6.4e+02,ATP13|PF12921.3|22,ATP13|PF12921.3|1.4e+02,ATP13|PF12921.3|13,ATP13|PF12921.3|1.2e+02,ATP13|PF12921.3|22 S_Transcript_87342:146-1375(+)
MTSSISIRLVRRLCTTSSSSSTTKPDISISRAKSKLRSEFDPDKALQIYSSVSNRYTSPVSARYAQELTVQRLAKAHRFDDIVSFLESHKKDPKITQEPFLCTIIRSYGRAGMFDHALQTYNQMDELGTPRSTVSFNALLAACNHSRLFDRVPQMFDEMSQRHGLVPDKISYGTLVKAHCEMGFPDKALKVLDEMEEKGVEVTAVVYTSILDAMYKTGDNDAAERIWDDMVKKGCSPDVAMFNVKISHVAGGEPEDVKGLIEDMTAMGLKPDTISYNYLLTSYCRNGRMEEAVKLYEELEASGFRPKAATFRTLIHYLCKNDDFVKGYDVFKRSVFHHKIPDVATLKVLVEGLVAKKQFKDAKGLIRTVKKRFPSNMLNAWNKVESELGLGSKESSPDDNSEESQEAVA*

Click here to download the sequence:
Link to NCBI Protein BLAST