Transcript Information: S_Transcript_87375.p1


Annotated TAIR IDAT1G29800.1
Annotated Gene NameRING/FYVE/PHD-type zinc finger family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:10432736-10435177 | Forward length=510
E-Value3.4E-230
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.5329165507401
Replicate 27.0255810322813
Replicate 37.3152752063444
Condition 2: 8 Hour
Replicate 110.126581994169
Replicate 29.4570011940744
Replicate 38.613666536836
Condition 3: 24 Hour
Replicate 19.437640539698
Replicate 26.7949230238211
Replicate 310.426990424461


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_87375.p1 GENE.S_Transcript_87375~~S_Transcript_87375.p1 ORF type:complete len:537 (+),score=99.18,Ysc84|PF04366.8|3.8e-31,FYVE|PF01363.17|4.6e-15 S_Transcript_87375:143-1753(+)
ATGGGTTGTAACACTAACAACCACCACTGTGTAGATACTCAAGTTGGCATAGAACAAACCCAGATTTTGGATTTGGCAGATGAACCCCACTGCCAGGTACCCGATTCCCAGCTGGATGTGAAGGAGCTTAAGGAGCATTTTAAACGCAGTTACACTTCTAGTCCTATGTGCTCAGTAATGAATCAAGTGTCCACACAGGCGTCTGATTACAATGAGTGTACACCTGAGGCTTCAATTGAGCCTTATAGTGATAGCTGCTCTAGAAATTCGCTAGATGACCATTTGGAGCAGCCAAAGTACTTCCGCTATGATGTGCCACTTGCTGAAGAAACCGGTGAGTGGATACCTGTTTCAGTGCCCCCATTGTCAAAAAGTGAGCATGATGAGTGGATGAATGGTTTTCCGTCAAGTGGAGGCTATTGTCGAGATAGAGCAATGTTCTTGGTGGACGAAAAAGAGTTGTCTATGTGGGATGTGGTTGTTGAACTGTTACTTGCAGGTCGAGGAAAAGTGGGCACTTTAGCTTCAAGTGACTCTCATAGGTTCAATATGTCATGTGTATCGAGCCAACTAATTGAGCAAGCATGGAAAGAGATGGCCCAGACTCTGACAGAAGCAAATCTTGATTCTGTGAAGGAAATACTTGAAACAAAGCCAGCTAAATGGCTACCTGACAGTGCTGCCTCGGCCTGCATGTTGTGTGGTGTAAGGTTTCATCCAATCATTTGTTCAAGGCATCACTGCCGTTTTTGTGGAGGTGTATTCTGTGGTGACTGTACTAAGGGAAGGAGTTTGTTACCTGCTAATTTCCGTCATGCAGATCCACAGCGTGTTTGTGATGTATGCTGTGTACGTCTTGAGTCAGTTAAGCCTTACTTGATGGACCAAGTTAGCCGTGCTGCTCAGTTGCCAACCCATGATGTGGTTGACCTTAGTACTTTGAGATCATGGTTAAATTTTCCATGGGGTGACTCAATGGAACACGAAATATATAAAGCAACTAACACCATCCGAGGTTATTGCAATAAGGTAGGTGCTTTGAGAGTGGAGAAGAAAATACCAGGTGCCATCTTAAAGCAAGCAAAAGGTCTTGCAATACTAAGTACTGCAAAAGTTGGAGCCATGATTAGCTACAACGTTGGAACTGGACTTGTGATTGCACGTAGAGAAGATGGTTCATGGTCACCACCATCAGCAATATCTTCTTTTGGTATAAGTTGGGGTGCTCAGGTTGGGGGTGAATTGACAGACTTCATAATCGTGCTAAGAACAGCTGATGCTCTCAACACCTTTAGTGGTAGTGGACATCTTTCACTTGGAGCTGGTTTAAGTGCGGCTATTGGCATTGCTGGAAGGACAGTTGGAGCAGATGTGCGGGCTGGCGATGGTGGACACAGTGCTTGTTATACCTACAGTTGCAGTAAAGGTGCATATCTTGGGTGTTCTTTAGAAAGCAATATCTTCATGACCAGAACGCAAGAGAATTCCCGATTCTATGGAAGCCAATTTATTAGTGCTTCAGAAATTTTACTTGGTTCCTTGCCCAGCCCACCTGCAGCATCCATCCTTTACCAAGTCCTGGCAGATTTGTATCAGAAACTCGAAGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_87375.p1 GENE.S_Transcript_87375~~S_Transcript_87375.p1 ORF type:complete len:537 (+),score=99.18,Ysc84|PF04366.8|3.8e-31,FYVE|PF01363.17|4.6e-15 S_Transcript_87375:143-1753(+)
MGCNTNNHHCVDTQVGIEQTQILDLADEPHCQVPDSQLDVKELKEHFKRSYTSSPMCSVMNQVSTQASDYNECTPEASIEPYSDSCSRNSLDDHLEQPKYFRYDVPLAEETGEWIPVSVPPLSKSEHDEWMNGFPSSGGYCRDRAMFLVDEKELSMWDVVVELLLAGRGKVGTLASSDSHRFNMSCVSSQLIEQAWKEMAQTLTEANLDSVKEILETKPAKWLPDSAASACMLCGVRFHPIICSRHHCRFCGGVFCGDCTKGRSLLPANFRHADPQRVCDVCCVRLESVKPYLMDQVSRAAQLPTHDVVDLSTLRSWLNFPWGDSMEHEIYKATNTIRGYCNKVGALRVEKKIPGAILKQAKGLAILSTAKVGAMISYNVGTGLVIARREDGSWSPPSAISSFGISWGAQVGGELTDFIIVLRTADALNTFSGSGHLSLGAGLSAAIGIAGRTVGADVRAGDGGHSACYTYSCSKGAYLGCSLESNIFMTRTQENSRFYGSQFISASEILLGSLPSPPAASILYQVLADLYQKLED*

Click here to download the sequence:
Link to NCBI Protein BLAST