Transcript Information: S_Transcript_87404.p1


Annotated TAIR IDAT1G56140.1
Annotated Gene NameLeucine-rich repeat transmembrane protein kinase
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:21001708-21007725 | Reverse length=1033
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.707880771761
Replicate 211.215431786843
Replicate 310.026767213263
Condition 2: 8 Hour
Replicate 18.3083218409242
Replicate 26.9157333871579
Replicate 36.2127642185274
Condition 3: 24 Hour
Replicate 16.6670841664129
Replicate 25.6715132011468
Replicate 36.0889331929917


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_87404.p1 GENE.S_Transcript_87404~~S_Transcript_87404.p1 ORF type:complete len:1019 (+),score=156.42,Malectin|PF11721.4|6.2e-50,Malectin|PF11721.4|6.3e+03,Pkinase|PF00069.21|1.8e-47,Pkinase_Tyr|PF07714.13|3.7e-46,LRR_8|PF13855.2|0.006,LRR_8|PF13855.2|60,LRR_8|PF13855.2|0.029,LRR_8|PF13855.2|3.4e-07,LRR_8|PF13855.2|0.82,LRR_8|PF13855.2|4e+02,LRR_4|PF12799.3|76,LRR_4|PF12799.3|13,LRR_4|PF12799.3|0.71,LRR_4|PF12799.3|0.041,LRR_4|PF12799.3|0.7,LRR_4|PF12799.3|0.0011,LRR_4|PF12799.3|2 S_Transcript_87404:232-3288(+)
ATGGATAGGGTGGTTTCACGGTGGCGGCTACCTCTACTGGCCGGGTGCGTGTTGTTGATGGTGATATGCCCTGTTGATGCTCAAAACAGGTCTCGAGCTGCCACTGCCCCTGCTGAAGCACAAGCATTAAACACAATATTACAACAATGGGGGAAGCCTGCAAACACTGATCAATGGAATACAACGGGAGATCCTTGCTCCGGGAAGGCTATCGACGATTCTGCTTCCATTGATGATCCTCAATACAACCCCTTCATCAAATGTGATTGTACTTATGATCGCAATACCACTTGCCACATTACTGCCCTGAAGGTTTATGCAATCGATGCAGTAGGTGTGATACCAGACAAGCTATGGACTTTGGTTTACCTCACTAACTTGAGGTTAGGACAGAACTACTTGTCCGGGCCTATATCTTCAGGCATTGGAAATTTGACACGCATGCAGTACCTGGACTTTGGCATAAATTTATTTTCTGGGCCACTTCCAAAAGAACTTGGTAAACTGACTGATCTGCGATCACTGGGTCTTGGAGCCAACAATTTCTCTGGCCCATTGCCATCAGAGATGGGAAGCCTAACAAAACTGGAAGGACTGTACATTGACAGTTCTGGAGTGAGTGGGGAAATTCCTCCATCATTTGCTAATTTGAAGAGCTTACAGACATTGTGGGCATCAGACACTGAACTTACTGGTTCAATACCCGAGTTCATAGGGAATTGGAGCCTGCTTCAAACCTTGAGGCTTGAAGGAAATGCATTGGCCGGACCACTACCAAAAGCACTTTCCACTTTGACCTCGTTGCAAGAGTTGAGGATCAGCGGCTTGTCAAATTCCAGCTTCACATTGGACTTCATGTCAAGTTTAACGTCCTTGAACATCTTGGTTTTGAAGAATAACAACATTACAGGTTCCATACCGAGCAGTATAGGAGAACTTCAAAGCTTAACTCAGCTGGACCTTAGCTTCAATAGCTTATCAGGACAAATTCCAAGCTCGCTGTTTAACCTGGGCTCCCTTTCGTACTTATTTCTTGGCGATAACAACCTTACTGGTAGCTTGCCCACTCAGAAAAGTTCCTCTCTGGTGAACATAGATGTGTCTTACAATCAATTATCTGGGAGCTTCCCGTCTTGGGTCAGCCAACGGAACCTAGAACTTAATATAGTTGCGAACAACTTTTCTTCAAGTGCAAATACCAGGAATTTGCCATCAGGATTGAACTGTGTGCAGAATGGATTCCCTTGCAACAGTGGGTTAGGACGCTACTCTGACTTTGCAGTCAAGTGTGGTGGTCCGCAAATCAAATCTTCCCAAGATGTTGTTTATGAAAAAGAAAATGAAGCTCTTGGACCTGCTACTTACTATGTGACTGACCCGAACAAATGGGCTGTCAGTAATGTCGGATTGTTTGCCTCAAACAACAATATGACATATACATATACCTCTCCACGCCAGTTCACCAGCCTAGACTCTGAGTTGTTCCAGACGACGAGACTGTCAGCTGGATCTCTACGATATTATGGTCTGGGGCTTCAGAATGGCAAATACAATGTACTCCTCCAATTTGCTGAGATACAAATAGAGAATGGCAAAACCTGGAAAAGTCTTGGAAGGCGTGTTTTTGACATTATTATTCAGGGAAATCGAGTGGAGAAAGATTTCAACATACGGAATGCAGCAGGCGGCCAGTCCTATAGACCTGTGCAGAGAAACTACACTGTTCAAGTGACAGCAAACCACCTCGAAATACATCTCTTCTGGGCTGGAAAGGGGACATGTTGCATACCTCTTCAAGGAACATATGGACCCTCTATATCAGCTCTCAGTGTCACTCCATTGTTTCAACCCAGGCCTATAAGCTCAACAGAAAACAAAAAGAAGACAGCTATTATTATCGGAACTGTTGTTCCTATTGTGACCATTGCGCTTCTCGCTTTGCTTGCTTGTTGGTTCATTCAAAGAAAGAAGAAAGCACGTGACGCAGATGATGAGCTCCTAGGCATTGAAGCCAAGCCATACACCTTCACTTATGCTGAGCTGAGGTCAGCTACTGGTGATTTCAATGCTTCAGACAAACTTGGTGAAGGAGGTTTTGGACCTGTCTATAAGGGAACCCTGAATGACGGAAGACTAACTGCAGTAAAACAACTTTCCGTAGCATCTCACCAAGGAAAGAGTCAATTTATAGCAGAAATAGCTACTATATCTACAGTACAGCATCGGAACCTTGTGAAACTATATGGATGCTGCATTGAAGGACAAAAGCGTTTGCTTGTTTATGAGTACTTAGAGAACAAGAGTCTTGATCAAGCTTTGTTTGGAAACAACAAGTTAAAACTTGATAGCTGGAGTAAGCGCTTTGAGATTTGCTTAGGAGTTGCAAGGGGCCTTGCTTATCTTCATCAAGAATCCCGCCTTCGAATTGTGCACAGAGATGTTAAGGCCAGTAATATTTTGCTGGATTCCGATCTCAACCCCAAAATTTCTGATTTTGGTCTGGCTAAATTGTATGATGACAAAAAGACTCATATCAGCACTCGTGTAGCCGGAACAATTGGATACCTTGCACCAGAGTACGCCATGCGTGGCCACCTCACCGAGAAGGTTGATGTGTTTGGTTTTGGTGTTGTTGCTCTAGAGATTGTGAGTGGACGCTCAAACACTGACAACAACTTGGATAGAGAACAAATTTATCTTCTTGAATGGGCATGGCATCTCCACGAGAGCAATCAAGATGTAGAACTAGTAGACAAAAGACTTTCAGAATTCAACGAGGATGAGGTGAAACGAGTGATTGGCGTAGCTCTTTTGTGCACTCAGACTTCACCAGCACAGCGCCCAACCATGTCCCGAGCATTGGCAATGCTGATTGGTGACGTTGAAGTTGAAACCGCCACATCAAAGCCGACATACTTAGCTGACTGGACATTTGATGACTCGAGCTTTATGACCAGTGATACCTCCGAAGTATCAAGAACTGGTTATTCCATTCAAAGTACTACTACTACTACAACTTCTGCACATACACCTACCGATAATGTCACACTTGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_87404.p1 GENE.S_Transcript_87404~~S_Transcript_87404.p1 ORF type:complete len:1019 (+),score=156.42,Malectin|PF11721.4|6.2e-50,Malectin|PF11721.4|6.3e+03,Pkinase|PF00069.21|1.8e-47,Pkinase_Tyr|PF07714.13|3.7e-46,LRR_8|PF13855.2|0.006,LRR_8|PF13855.2|60,LRR_8|PF13855.2|0.029,LRR_8|PF13855.2|3.4e-07,LRR_8|PF13855.2|0.82,LRR_8|PF13855.2|4e+02,LRR_4|PF12799.3|76,LRR_4|PF12799.3|13,LRR_4|PF12799.3|0.71,LRR_4|PF12799.3|0.041,LRR_4|PF12799.3|0.7,LRR_4|PF12799.3|0.0011,LRR_4|PF12799.3|2 S_Transcript_87404:232-3288(+)
MDRVVSRWRLPLLAGCVLLMVICPVDAQNRSRAATAPAEAQALNTILQQWGKPANTDQWNTTGDPCSGKAIDDSASIDDPQYNPFIKCDCTYDRNTTCHITALKVYAIDAVGVIPDKLWTLVYLTNLRLGQNYLSGPISSGIGNLTRMQYLDFGINLFSGPLPKELGKLTDLRSLGLGANNFSGPLPSEMGSLTKLEGLYIDSSGVSGEIPPSFANLKSLQTLWASDTELTGSIPEFIGNWSLLQTLRLEGNALAGPLPKALSTLTSLQELRISGLSNSSFTLDFMSSLTSLNILVLKNNNITGSIPSSIGELQSLTQLDLSFNSLSGQIPSSLFNLGSLSYLFLGDNNLTGSLPTQKSSSLVNIDVSYNQLSGSFPSWVSQRNLELNIVANNFSSSANTRNLPSGLNCVQNGFPCNSGLGRYSDFAVKCGGPQIKSSQDVVYEKENEALGPATYYVTDPNKWAVSNVGLFASNNNMTYTYTSPRQFTSLDSELFQTTRLSAGSLRYYGLGLQNGKYNVLLQFAEIQIENGKTWKSLGRRVFDIIIQGNRVEKDFNIRNAAGGQSYRPVQRNYTVQVTANHLEIHLFWAGKGTCCIPLQGTYGPSISALSVTPLFQPRPISSTENKKKTAIIIGTVVPIVTIALLALLACWFIQRKKKARDADDELLGIEAKPYTFTYAELRSATGDFNASDKLGEGGFGPVYKGTLNDGRLTAVKQLSVASHQGKSQFIAEIATISTVQHRNLVKLYGCCIEGQKRLLVYEYLENKSLDQALFGNNKLKLDSWSKRFEICLGVARGLAYLHQESRLRIVHRDVKASNILLDSDLNPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKVDVFGFGVVALEIVSGRSNTDNNLDREQIYLLEWAWHLHESNQDVELVDKRLSEFNEDEVKRVIGVALLCTQTSPAQRPTMSRALAMLIGDVEVETATSKPTYLADWTFDDSSFMTSDTSEVSRTGYSIQSTTTTTTSAHTPTDNVTLV*

Click here to download the sequence:
Link to NCBI Protein BLAST