Transcript Information: S_Transcript_87457.p1


Annotated TAIR IDAT4G24840.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein transport, Golgi organization; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: COG complex component, COG2 (InterPro:IPR009316); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:12796525-12800926 | Reverse length=756
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.1346723143108
Replicate 27.3542631858383
Replicate 37.0466317051965
Condition 2: 8 Hour
Replicate 19.2157154466662
Replicate 27.8994142759509
Replicate 39.5205169144778
Condition 3: 24 Hour
Replicate 17.4543146562107
Replicate 27.405303387265
Replicate 37.0448925084119


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_87457.p1 GENE.S_Transcript_87457~~S_Transcript_87457.p1 ORF type:complete len:759 (+),score=141.35,COG2|PF06148.7|2.9e-37,COG2|PF06148.7|1.4e+04,DUF3510|PF12022.4|3e-32 S_Transcript_87457:167-2443(+)
ATGGCGTCCCCAGATCTAGCCCCACCACCACCCCCGCGAACCCCAACAGACCTATTCGGGGACCCAATCGACGACTCTAACCCATTATGGTTCAAGAAGGACCTCTTTCTCTCTCCAGATTTCGACCCGGAATCCTACATTTCGGACCTCCGTACCTTCGTCCCTTTCGAAACTCTCCGATCGCAGCTCCAATCTCACCTCTCCTCTCTCAAACACGAGCTCGTCGATCTAATCAATCGCGATTACAATGACTTCGTCAATCTCAGCACCAAGCTTGTCGACGTGGATTCTGCTGTTGCTCGTATGCGGGCCCCATTGTCGGATCTCAGAGAAAAGATTCTCGCTTTTAGGGTTTCTGTTGAGAGTTCTTTGGTTTCTATTAAGGAGGGCTTGAGGCAAAGAGCTGATGCTGCTAATGCTAGGGAGGTTCTCGAACTCTTGCTTGATGCCTTCCATGTTATCTCTAAGATTGAGAAATTAATAAAAGAGCTACCTAGTGTACCTGCTGATTGGTCAAATGGTGACCTGCATGTGTCAGAGAAGAGTCATCTGAGCAATGGAATGTCAGTGCAACAATCTGAGAGCGAATCAAATGTAAGAGAGACTCAGAGCATGCTTCTGGAGAGAATTGCCAGTGAAATGAACAGGTTGAAGTTCTATATGGCTCATGCGCAGGACCTACCTTTCATTCAGAACATTGAGAAGAGATTTCAGAGTGCTAGTCTTTTATTAGATGCAAGCTTGGGGCATTGCCTTGTAGATGGTCTAGAGCACCGAGATGAAATTTCCATATACAACTGTTTACGCGCCTATGCTGCTATTGACAGCACAACAAATGCTGAAGAAATTTTTCGAACAACTATTGTTGCCCCCTTCATACAGAAGGTGATTCCTCATAGTTCTTCAGGATTGATAGGTGAGGCTTCTGGGGATGAACTTGAAGCAGATTTTCAGGAAATTAAACGGCATATTGAGAAAGAGTGTACTTTCTTGTTGGGAATTTCTTCTCGAGAGAATGCGGGTTTTCATGTATTTGACTTCTTAGCCAATTCGATACTTAAAGAGGTTCTGTCAGCAATTCAAAAGGGAAAGCCCGGGGCTTTCTCACCTGGAAGGCCTACAGAATTTTTGAAAAATTACAAATCAACTTTAGATTTTCTCTCTCATCTGGAAGGCTACTGCACATCCAGATATGCCGTCTCCAAATTTAGGGCTGAGCCTATATATATTGACTTTATGAAGCAATGGAATCTTGGAGTTTACTTCTCATTGAGGTTTCAAGAAATAGCAGGGGCTCTGGATGCTGCTCTCATAGCTCCCAATCTAGTTGTAGCTCTTGATTCAAGTGAGGGGAGTAAATCTCCAGCTTTCACTTTGAAACAAAGTGTTGCTCTCTTTGAGAGTTTGAGATCTTGTTGGAGAGAAGATGTCCTTGTCCTATCTTGCTCAGACAAGTTTCTTCGTTTATCTTTGCAGCTTCTTTCAAGGTACTACAATTGGCTGTCACTTGGATTTGATGCTCGGACATCGGGTAATGCAAATGCCAACCCTGGATCTGAATGGGCAATCTCTGCTGCACCAGAAGATTTTATATATGTTATTCATGACATAAAGCTTCTTGTAGCTGAGGTTTCTGGTGACTACCTTGGACATGTTATCCAGCTTCTTTCATCTTGCCCCACTGAAGTATTAGATTCTGTTAAACAGAGCATATTGCAGAGTGGGAAAGCTTTGGAGGATATTGCTCCTGCAGTAATGCAATCAATTATAGACGCACTGGTTGAGAAGTCCGTTGAGGACCTAAGACAGCTGAAAGGGATAAGTGCAACATACAGGATGACCAATAAACCTCTTCCTGTCCGGCATTCTCCTTATGTTTCAGGGATACTTCGTCCTCTGAAGGTCTTCTTGGAAGGGGAGAGGGCTTCCACCTATTTGGATAGCACATCAAAAACAGAACTTCTACGTGGTACTGCACTTGAGATCACCAATAGATATAACGAATTGGCGTCAGACCTTGTCAATGTGGCAAGAAAAACGGCCACTTCACTACAGAAATTGCGGCGAGGTGCACAAAGGCGAGCTGGAGCAAGCTCCGATGGGACGGAAAATAATGTGTCTGATATTGATAAAATTTGCATGCAGTTGTTCCTTGATATACAGGAGTATGGTCGCAATCTAGCCGCCCTTGGAGTTGATGCTGCCGATATCCCTTCCTATCGGCTGTTGTGGCAATGTGTGGCACCTCAAGACAAGCAAAATACAATAACCTTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_87457.p1 GENE.S_Transcript_87457~~S_Transcript_87457.p1 ORF type:complete len:759 (+),score=141.35,COG2|PF06148.7|2.9e-37,COG2|PF06148.7|1.4e+04,DUF3510|PF12022.4|3e-32 S_Transcript_87457:167-2443(+)
MASPDLAPPPPPRTPTDLFGDPIDDSNPLWFKKDLFLSPDFDPESYISDLRTFVPFETLRSQLQSHLSSLKHELVDLINRDYNDFVNLSTKLVDVDSAVARMRAPLSDLREKILAFRVSVESSLVSIKEGLRQRADAANAREVLELLLDAFHVISKIEKLIKELPSVPADWSNGDLHVSEKSHLSNGMSVQQSESESNVRETQSMLLERIASEMNRLKFYMAHAQDLPFIQNIEKRFQSASLLLDASLGHCLVDGLEHRDEISIYNCLRAYAAIDSTTNAEEIFRTTIVAPFIQKVIPHSSSGLIGEASGDELEADFQEIKRHIEKECTFLLGISSRENAGFHVFDFLANSILKEVLSAIQKGKPGAFSPGRPTEFLKNYKSTLDFLSHLEGYCTSRYAVSKFRAEPIYIDFMKQWNLGVYFSLRFQEIAGALDAALIAPNLVVALDSSEGSKSPAFTLKQSVALFESLRSCWREDVLVLSCSDKFLRLSLQLLSRYYNWLSLGFDARTSGNANANPGSEWAISAAPEDFIYVIHDIKLLVAEVSGDYLGHVIQLLSSCPTEVLDSVKQSILQSGKALEDIAPAVMQSIIDALVEKSVEDLRQLKGISATYRMTNKPLPVRHSPYVSGILRPLKVFLEGERASTYLDSTSKTELLRGTALEITNRYNELASDLVNVARKTATSLQKLRRGAQRRAGASSDGTENNVSDIDKICMQLFLDIQEYGRNLAALGVDAADIPSYRLLWQCVAPQDKQNTITF*

Click here to download the sequence:
Link to NCBI Protein BLAST