Transcript Information: S_Transcript_87526.p1


Annotated TAIR IDAT5G54580.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22171332-22172656 | Forward length=156
E-Value5.1E-52
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1141.76206540309
Replicate 2115.50519238934
Replicate 3123.43373692554
Condition 2: 8 Hour
Replicate 1154.43485275414
Replicate 2163.62155965918
Replicate 3132.910579184
Condition 3: 24 Hour
Replicate 198.944472280927
Replicate 286.803879632285
Replicate 386.216530875005


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_87526.p1 GENE.S_Transcript_87526~~S_Transcript_87526.p1 ORF type:complete len:153 (-),score=26.06,RRM_1|PF00076.18|7.3e-19,RRM_6|PF14259.2|1.6e-08 S_Transcript_87526:227-685(-)
ATGGCGATGAGAGCAGCGATGTCAATGGCGGCGGCGCCTAGAGGCGGCCTAGGGTTGGGGTTAGGGTTAGGGCGTCTTTTCTCAACATCAAACTTCAACTTCATGTCGCCACCTCCACCTCAACCTGCTTCCGCTAATCCTCCTGCCGAACCTAACCCGAACGTCTTCGTTTCCGGGCTTAGCAAACGTACCACTACAGAAGGTCTACGAGAAGCATTCACGAAGTTCGGTGAAGTGGTTCATGCAAAAGTGGTGACTGATCGCGTCTCAGGTTTTTCTAAAGGATATGGGTTTGTTAGGTATGCTACTACAGAAGATGCTAGAGCGGGAATACAGGGCATGGATGGCAAGTTCTTGGATGGATGGGTGATATTTGCTGAGTTTGCTAGACCAAGGCCAATGCCTGCCTACCAACAGCAAAATGGGAACAATCCTTATGGAACAACGGGTCAACAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_87526.p1 GENE.S_Transcript_87526~~S_Transcript_87526.p1 ORF type:complete len:153 (-),score=26.06,RRM_1|PF00076.18|7.3e-19,RRM_6|PF14259.2|1.6e-08 S_Transcript_87526:227-685(-)
MAMRAAMSMAAAPRGGLGLGLGLGRLFSTSNFNFMSPPPPQPASANPPAEPNPNVFVSGLSKRTTTEGLREAFTKFGEVVHAKVVTDRVSGFSKGYGFVRYATTEDARAGIQGMDGKFLDGWVIFAEFARPRPMPAYQQQNGNNPYGTTGQQ*

Click here to download the sequence:
Link to NCBI Protein BLAST