Transcript Information: S_Transcript_87691.p1


Annotated TAIR IDAT4G02820.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:1258581-1260265 | Forward length=532
E-Value6.4E-203
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.2466877662142
Replicate 24.4451831086305
Replicate 34.4998912440578
Condition 2: 8 Hour
Replicate 16.5828838871741
Replicate 26.9472653816526
Replicate 36.7769423069442
Condition 3: 24 Hour
Replicate 14.4820370932642
Replicate 23.7703198555846
Replicate 32.7972692501053


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_87691.p1 GENE.S_Transcript_87691~~S_Transcript_87691.p1 ORF type:5prime_partial len:541 (+),score=88.24,PPR_2|PF13041.2|4.3e+03,PPR_2|PF13041.2|6.3e+03,PPR_2|PF13041.2|0.33,PPR_2|PF13041.2|0.0089,PPR_2|PF13041.2|2.2e-06,PPR_2|PF13041.2|1.8e+02,PPR_2|PF13041.2|0.0059,PPR_2|PF13041.2|0.063,PPR_2|PF13041.2|1.3e+03,PPR_2|PF13041.2|55,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|0.0098,PPR|PF01535.16|1.7e+02,PPR|PF01535.16|0.93,PPR|PF01535.16|4.4,PPR|PF01535.16|1.3e+03,PPR|PF01535.16|0.00084,PPR|PF01535.16|0.28,PPR|PF01535.16|6.5e+02,PPR|PF01535.16|5.2e+03,PPR|PF01535.16|30,PPR_3|PF13812.2|2.1,PPR_3|PF13812.2|46,PPR_3|PF13812.2|4.6,PPR_3|PF13812.2|1.3e+03,PPR_3|PF13812.2|8.8,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|4.7e+03,PPR_3|PF13812.2|58,PPR_1|PF12854.3|4.1e+02,PPR_1|PF12854.3|1.6e+02,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|0.12,PPR_1|PF12854.3|16,PPR_1|PF12854.3|3.3e+02,TPR_19|PF14559.2|1.8e+03,TPR_19|PF14559.2|7.6e+02,TPR_19|PF14559.2|2.6e+02,TPR_19|PF14559.2|0.02,TPR_19|PF14559.2|4.7e+02 S_Transcript_87691:2-1624(+)
GAGTCAAAAGAAGGGGAAGTGGGGAGAAACAGAAGCAAAGAAAAGATGTTACAACGCCAAATCCGAGTAGCCGCCATGAGGGCGGTCCGATATTACACAGCCGCAGCTCCGGCGCCGGAGACGGTGGCGGCAATAGAAGCATCTAATTCCTCCGAATCAATCACAGCTACTTCTTCTTCTGGGAAAGGAAAGGGTAAGGGTGGAGATACATTGGGGCGTAGGCTGCTAGCCCTTGTACTACCAAAACGCAGCGCAGTGGTGACAATTAACAAGTGGAAAGAACAAGGCCATGCCGTTCGTAAGTACGAACTCAATCGTATTGTTCGTGAACTTCGCCGTCTCAGGCGTTACAAGCACGCCCTCGAGATTTGTGAATGGATGACTACACAAGAAGATATGAGGTTGTTATCGGGAGATTACGCTATCCATTTGGACTTGATCGCAAAACTTAGGGGCTTACGTAGTGCTGAGAAGTTTTTTGAAGATCTGCCTGATGAAATGAGGAAGCCGCCCACCCTTTCAGCCCTGTTGCACACATATGTTAAGAACCGTCAACATGCTAAGGCGGAGTCTCTAATGTCGAGAATGGTAGAATGTGGTTATGTCGACTGCCCCCTTCCTTATAACCACATGTTGACGATGTACTTGGAGAGTGGGAACTTGCACAAAATTCCTCCTTTGGTCGAAGAGTTGAAGAAGAACACAAAGCCAGATACTGTCTCTTATAATTTATGGTTAACAATGTGTCAACATCAGAATGATGATCAAGCTGCAGAAAAGGTGTTTCTTGAAATGAGAAGGGCAAAGATTGTTGCAGATTGGATGACGTATAGCATATTAACGAGCCTGTATACGAAGAAGGAATTGAATGATAAAGCGGAGGCCACGTTGAAGGAAGTGGAGAAAAGGATATCTCGTCAGAATCGAGTAGCATATTTTTCTCTTATCAGCTTGCAAGCAAATCTGGGCAAGAAAGATGAACTGTACAGAGTATGGAAGAAGATTAAGTCACTTTTTCACAAAGCAAATGATGTGGAGTACACCAGCATGATATCCTCCCTTCTAAGGGTTGGGGAGCTGGAAGAAGCCGAGAAGCTGTACACTGAGTGGGAATCCGTTTCTACAAGTGGTGACTCCAGGATCCCAAATTTGCTAGTTGCTGCTTATGTCAACAGCGGGCAGATGGACAAAGCAAGGAGGTTTTTGGACAACTTCAGACTGAAAGGCATTAAGCCAAGTTATACCTCATGGGAGCTTCTCACTTGGGGTTACCTGAAAGAGGACGACATAGACCAAGTCCTTTATTGCTTTGAACAAGCTGTCAAGAGTGTGAAGAGATGGGAACCTGATATGAATATCATCAGCGAGGTTTATAAGCAGTTACAGGAGCAGGGAAACATCCAGGGTGCCGAGAAGATGCTTTTGGTCCTTCGTGAAGCTGGCTATATGTTCACAGAGGTGTACAATATGGTTCTTCGAACCTATGCTAAGGCCGGAAAGATGCCACCTATAGTTTCAGAGCGCATGGAGAAGGATAATGTATTGTTAAATGAAACCACAGAGGAACTGGTCAGCCAAACTAGCAAAATGTGTGTTACTGATGTTTCAAGTTGTTTAACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_87691.p1 GENE.S_Transcript_87691~~S_Transcript_87691.p1 ORF type:5prime_partial len:541 (+),score=88.24,PPR_2|PF13041.2|4.3e+03,PPR_2|PF13041.2|6.3e+03,PPR_2|PF13041.2|0.33,PPR_2|PF13041.2|0.0089,PPR_2|PF13041.2|2.2e-06,PPR_2|PF13041.2|1.8e+02,PPR_2|PF13041.2|0.0059,PPR_2|PF13041.2|0.063,PPR_2|PF13041.2|1.3e+03,PPR_2|PF13041.2|55,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|0.0098,PPR|PF01535.16|1.7e+02,PPR|PF01535.16|0.93,PPR|PF01535.16|4.4,PPR|PF01535.16|1.3e+03,PPR|PF01535.16|0.00084,PPR|PF01535.16|0.28,PPR|PF01535.16|6.5e+02,PPR|PF01535.16|5.2e+03,PPR|PF01535.16|30,PPR_3|PF13812.2|2.1,PPR_3|PF13812.2|46,PPR_3|PF13812.2|4.6,PPR_3|PF13812.2|1.3e+03,PPR_3|PF13812.2|8.8,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|4.7e+03,PPR_3|PF13812.2|58,PPR_1|PF12854.3|4.1e+02,PPR_1|PF12854.3|1.6e+02,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|0.12,PPR_1|PF12854.3|16,PPR_1|PF12854.3|3.3e+02,TPR_19|PF14559.2|1.8e+03,TPR_19|PF14559.2|7.6e+02,TPR_19|PF14559.2|2.6e+02,TPR_19|PF14559.2|0.02,TPR_19|PF14559.2|4.7e+02 S_Transcript_87691:2-1624(+)
ESKEGEVGRNRSKEKMLQRQIRVAAMRAVRYYTAAAPAPETVAAIEASNSSESITATSSSGKGKGKGGDTLGRRLLALVLPKRSAVVTINKWKEQGHAVRKYELNRIVRELRRLRRYKHALEICEWMTTQEDMRLLSGDYAIHLDLIAKLRGLRSAEKFFEDLPDEMRKPPTLSALLHTYVKNRQHAKAESLMSRMVECGYVDCPLPYNHMLTMYLESGNLHKIPPLVEELKKNTKPDTVSYNLWLTMCQHQNDDQAAEKVFLEMRRAKIVADWMTYSILTSLYTKKELNDKAEATLKEVEKRISRQNRVAYFSLISLQANLGKKDELYRVWKKIKSLFHKANDVEYTSMISSLLRVGELEEAEKLYTEWESVSTSGDSRIPNLLVAAYVNSGQMDKARRFLDNFRLKGIKPSYTSWELLTWGYLKEDDIDQVLYCFEQAVKSVKRWEPDMNIISEVYKQLQEQGNIQGAEKMLLVLREAGYMFTEVYNMVLRTYAKAGKMPPIVSERMEKDNVLLNETTEELVSQTSKMCVTDVSSCLT*

Click here to download the sequence:
Link to NCBI Protein BLAST