Transcript Information: S_Transcript_87704.p1


Annotated TAIR IDAT3G21540.1
Annotated Gene Nametransducin family protein / WD-40 repeat family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:7586100-7590856 | Reverse length=955
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.7303785766129
Replicate 28.7561696056387
Replicate 39.6632252604699
Condition 2: 8 Hour
Replicate 115.483121928168
Replicate 214.891261750818
Replicate 315.853661656205
Condition 3: 24 Hour
Replicate 16.3259141774846
Replicate 26.2561563205542
Replicate 36.0427814720591


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_87704.p1 GENE.S_Transcript_87704~~S_Transcript_87704.p1 ORF type:complete len:960 (+),score=235.26,WD40|PF00400.28|0.011,WD40|PF00400.28|5.2e-05,WD40|PF00400.28|0.0032,WD40|PF00400.28|0.00024,WD40|PF00400.28|1.6e+04,WD40|PF00400.28|1.6e+04,WD40|PF00400.28|0.065,WD40|PF00400.28|1.9e+03,WD40|PF00400.28|0.00019,WD40|PF00400.28|26,WD40|PF00400.28|1.2e-05,WD40|PF00400.28|8.8,WD40|PF00400.28|9.8e-06,Utp12|PF04003.8|1e-21,WD40_like|PF17005.1|85,WD40_like|PF17005.1|24,WD40_like|PF17005.1|1.8e+03,WD40_like|PF17005.1|10,WD40_like|PF17005.1|0.003,Nup160|PF11715.4|3,Nup160|PF11715.4|0.16,Nup160|PF11715.4|68,Nup160|PF11715.4|38,Nup160|PF11715.4|1.5e+02,Nup160|PF11715.4|91 S_Transcript_87704:152-3031(+)
ATGGTGAAGTCATACCTGAGGTATGAAGCATCAGAAACATTTGGGGTGATAGCTTCAGTAGAATCAAACATAAGCTATGATAGTTCAGGGAAGTTACTTCTATGTCCTGCTCTTGAGAAAGTTGGGGTTTGGCATGTTCGTCAAGGGGTTATTACCAAAACCCTTTCTCCTTCTCCTTCTTCTCCTGGTCCTTCTCTTGCTGTTACCTCCATTGTCTCTTCTTCATCTTCTCAGGTGGCTGTAGGGTATGCTGATGGTAGTATAAGATTATGGGATTTGAGTAAGGGAACTTGTGAGACAACATTGAACGGGCATAAAGGAGCTGTGACAGCTCTTTGTTATAATGAGACTGGTTCTTTGCTTGCTTCTGGTAGTAAAGATAATGATATTATCCTGTGGGATGTGGTTGGCGAGACTGGCCTTTATCGTCTTCGTGGTCACCGTGATCAGGTGACAGACATGGGTTTCGTGGACTCTGGTAAAAAGTTGGTTAGCTCCTCTAAGGACAAATTCTTAAGAGTTTGGGATCTTGACACCCAACATTGTATGCAAATTGTTAGTGGTCATCATAGCGAAATTTGGTCCATAGATGTAGATCCAGAGGAGAGATATTTGGTTACAGGATCAGCAGACCCTGAACTTCGGTTTTACACTATTATTAAGCATGACTTGGAAGGTTTACGATCTGTGGCGACGTCAGAACCTAATGATGACAATGTTCCCTCATCGGCCAGTAACAAATGGGAAGTTCTAAAACCTTTTGGTGAAATTCAAAGGCAGAATAAAGATCGAGTTTCCACTGTAAGGTTTAACAAGTCCGGTAATCTTTTGGCCTGCCAGGTGGCAGGGAAGACGGTAGAGATATTTCGTGTGTTAGATGAAAATGAATCTAAGCGCAAAGCTAAACGCAGAGTTCACAGGAAGAAAGAGAAGAAGGAGAAAAATTCCTCAAAAAAGACAGCTGAGGCTATGGAGAATCGAGATGAAAACCAGGGTTCACAAGAGGAAGAGAATGCCCCTGCCATTGTAGTCTCTGATATCTTCAGACTTCTTCATACCCTAAGAGTTGGGAAGAAAATATGTTCCGTCTCCTTCTGTCCAAATTCTAAGAATTCCTCAGCCACTTTAGCGTTGTCATTGAACAACAACTCAGTAGAAATATATTCTGTAGGAAGTGACGCAACTACACAGACATTGGCTCTTGAGCTCCAGGGTCACCGTTCTGATGTGAGAAGTCTTAGCCTCAGTGCTGATAACACTCTTTTACTATCGACTAGTCACAATGCAGTAAAGATTTGGAACCCCAGTACTGGTGCGAGTCTTCGAACTATTGATTCTGGTTATGGACTCTGCAGCATGTTTGTTCCTGTTGTTCCAAGCACCAAGTATGCACTTGTTGGAACAAAAGACGGAAAGATTGAAATCATTGATGTCGGGAGTGCTACATGTGTGGAGATAGTTGAGGCTCATGGAGGCTCTATTCATTCAATTGCTGGCATTCCAGATGGAAGTGGTTTTGTTACTGGAAGTGCTGATCATGATGTAAAGTTCTGGGAATATCGCAGTTTGCAGAAACCTTGTGAAGATGTTAAGCGCTTAACAGTGTCAAATGTGAGGACGATGAAAATGAATGATGATGTATTGAAGGTTGCTCTAAGTCCAGATGCAAAGTATATTGCTGTTGCACTGTTGGATTGTACGGTGAAGGTTTTCTTTGTGGATACACTAAAATTTTTTTTGACGCTTTATGGTCACAAGCTACCTGTTCTATGTATGGATATATCATCTGATGGAGACTTGATAGTTACTGGTTCTGCTGACAAAAACTTGAAGATTTGGGGTTTGGATTTTGGTGACTGCCATAAATCCATTTTTGCCCATGCTGATAGTGTTATGGATGTGAAGTTTGTTCCTAATACTCACTACATATTTAGTGTTGGAAAGGACCGACTTTTGAAATACTGGGACGCAGATAAGTTTGAGTTGCTCCTGACTCTTGAAGGACATCATGCTGAGGTATGGTGTCTTGCAGTCAGCAGTCGTGGTGATTTTGTTGTAACAGGATCTCATGATAGGTCTCTACGGCGTTGGGACCGCACTGAAGAGCCATTTTTCATTGAGGAAGAGAAAGAGAAAAGGTTGGAGGAGATGTTTGAAGCCGACATTGATGGAGCATTTGAAAATAAATTTGCTCCAAAGGAAGAGCTTCCAGAAGAGGGAGCTGTAGCATCAGCTGGAAAGAAAACTCAGGAGACCTTAACGGCCACTGACTCAATTATCGAGGCATTGGACATGGCAGAAGCAGAGATGAAGCGTATAGCTGAATATGAGGTGGAGAAAACACAGGGAAAGGTGCCTGATTTTCGGCCCAACATTCTTATGCTTGGACTTTCACCTTCTGATTATGTTCTTCGCTCACTTTCAAATGTTAAAACCAGTGATCTTGAGCAGACTTTACTGGCATTGCCATTCTCTGATGCTTTGAAGCTTCTCTCTTATTTGAAGAATTGGACAATTTATTCTGAAAAGGTTGAACTTATTTGCAGGGTTGCAGTGATATTGTTGCAGACACATTATCATCAATTGATTAGCACACCTTCTGCAAGGCCTGTCTTGAGTCATCTCAAAGATGTCCTACATGCAAGAGTGAAGGAGTGCAAAGATACCCTTGGCTTTAACCTTGCTGCAATGGATCATCTTAAGCAACTAATTGCCATGAAATCTGATGCGCCTTTCCGAGATGCTAAGATGAAATTGCTGGAAATCCGTTCACGGCTTGTAAAGCAGAATGATGGAAGGATGGAGACAAGAGAGGAGAGGAGGAAGAAAAAGAAGCAGAAGAAAGGAAGCGATGGACATGCTTGGAGTGTTGTGAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_87704.p1 GENE.S_Transcript_87704~~S_Transcript_87704.p1 ORF type:complete len:960 (+),score=235.26,WD40|PF00400.28|0.011,WD40|PF00400.28|5.2e-05,WD40|PF00400.28|0.0032,WD40|PF00400.28|0.00024,WD40|PF00400.28|1.6e+04,WD40|PF00400.28|1.6e+04,WD40|PF00400.28|0.065,WD40|PF00400.28|1.9e+03,WD40|PF00400.28|0.00019,WD40|PF00400.28|26,WD40|PF00400.28|1.2e-05,WD40|PF00400.28|8.8,WD40|PF00400.28|9.8e-06,Utp12|PF04003.8|1e-21,WD40_like|PF17005.1|85,WD40_like|PF17005.1|24,WD40_like|PF17005.1|1.8e+03,WD40_like|PF17005.1|10,WD40_like|PF17005.1|0.003,Nup160|PF11715.4|3,Nup160|PF11715.4|0.16,Nup160|PF11715.4|68,Nup160|PF11715.4|38,Nup160|PF11715.4|1.5e+02,Nup160|PF11715.4|91 S_Transcript_87704:152-3031(+)
MVKSYLRYEASETFGVIASVESNISYDSSGKLLLCPALEKVGVWHVRQGVITKTLSPSPSSPGPSLAVTSIVSSSSSQVAVGYADGSIRLWDLSKGTCETTLNGHKGAVTALCYNETGSLLASGSKDNDIILWDVVGETGLYRLRGHRDQVTDMGFVDSGKKLVSSSKDKFLRVWDLDTQHCMQIVSGHHSEIWSIDVDPEERYLVTGSADPELRFYTIIKHDLEGLRSVATSEPNDDNVPSSASNKWEVLKPFGEIQRQNKDRVSTVRFNKSGNLLACQVAGKTVEIFRVLDENESKRKAKRRVHRKKEKKEKNSSKKTAEAMENRDENQGSQEEENAPAIVVSDIFRLLHTLRVGKKICSVSFCPNSKNSSATLALSLNNNSVEIYSVGSDATTQTLALELQGHRSDVRSLSLSADNTLLLSTSHNAVKIWNPSTGASLRTIDSGYGLCSMFVPVVPSTKYALVGTKDGKIEIIDVGSATCVEIVEAHGGSIHSIAGIPDGSGFVTGSADHDVKFWEYRSLQKPCEDVKRLTVSNVRTMKMNDDVLKVALSPDAKYIAVALLDCTVKVFFVDTLKFFLTLYGHKLPVLCMDISSDGDLIVTGSADKNLKIWGLDFGDCHKSIFAHADSVMDVKFVPNTHYIFSVGKDRLLKYWDADKFELLLTLEGHHAEVWCLAVSSRGDFVVTGSHDRSLRRWDRTEEPFFIEEEKEKRLEEMFEADIDGAFENKFAPKEELPEEGAVASAGKKTQETLTATDSIIEALDMAEAEMKRIAEYEVEKTQGKVPDFRPNILMLGLSPSDYVLRSLSNVKTSDLEQTLLALPFSDALKLLSYLKNWTIYSEKVELICRVAVILLQTHYHQLISTPSARPVLSHLKDVLHARVKECKDTLGFNLAAMDHLKQLIAMKSDAPFRDAKMKLLEIRSRLVKQNDGRMETREERRKKKKQKKGSDGHAWSVVR*

Click here to download the sequence:
Link to NCBI Protein BLAST