Transcript Information: S_Transcript_87784.p1


Annotated TAIR IDAT2G31160.1
Annotated Gene NameProtein of unknown function (DUF640)
Annotated Gene Symbol(s)LSH3
Annotation TypeOrtholog
Chromosome Positionchr2:13277903-13278562 | Forward length=219
E-Value2.5E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2454719792184
Replicate 21.3789243473447
Replicate 31.6713729575763
Condition 2: 8 Hour
Replicate 11.0662695158566
Replicate 20.55929621599317
Replicate 30.3996721425934
Condition 3: 24 Hour
Replicate 11.0239789136216
Replicate 21.2040149899935
Replicate 32.8374799955756


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_87784.p1 GENE.S_Transcript_87784~~S_Transcript_87784.p1 ORF type:complete len:320 (+),score=39.54,IQ|PF00612.23|1.3e-05,IQ|PF00612.23|0.00056,IQ|PF00612.23|8e+02 S_Transcript_87784:354-1313(+)
ATGGGAAAAGCCACGAGATGGTTGAAGGGGATATTCGGGATAAAACCCAACAACACTACCAAAGACCAAAAGGACCCAAACTTTTCTACCTCCGGTGACCGGAAGAGGGCCAGTTTTGGCCATTCCGGTAGAGATTCCGGCACCGGAGTCAAGGAGAAGCGTGAAAATATGACCAAATTATCACCCTCAAATAGTCGTGCTTGGATGAAGTCATACTACTCAGAGTCCGAAAAGGAGCAGAGCAAGCATGCCATTGCGGTGGCTGCCGCCGCTGATGCGGCCGTTGCGGCTGCTCAAGCCGCTGTTGCGGTTGTCCGCCTTACAAGTCATGGTAGAGGAAGTGTGTTTTCAGCTCCTGGTGGAGCCGCCGGTAGAGAAAAATTGGCAGCTGTTAAAATTCAGACCACCTTTCGTGGTTATCTCGCAAGAAAGGCGCTAAGAGCATTGAAAGGACTAGTGAAGATACAAGCACTAGTGAGAGGGTACTTGGTAAGGAAACAAGCGACTGCCACACTTCATGGGATGCAAGCATTGATCAGAGCTCAGGCCACTGTCAGGTCCAGACGAGCCCAAGCCCATTTCACTAACCACGATTTTTCTGATTTCAGAGCTCGCAGATCCATGGAAATATTTGATGACACCAGGAGTGAACACGCAGCCTCAATACACAGTAGAAGACTGTCAGCATCATTTGAGAGCAGGACCATCAACCCAATAATCGAAGACACACCCAAAATTGTCGAGGTGGATCCGGGTCGACCCAGATCATCAAGAGCCTGGAGAACCACCAATGGGCCAGGACCCAGATCCGAATGTCGCGAACACGACCCCTTTTACCCGCCCCGAATATCAATCCCAAACTGCCACCACTGGCATCCTCATCATCACCATCATCATCATCAAGCAGCAGGTATGAGAACCAGAAAAGAAGAGACTGGAACACCTTTGGCCAATATCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_87784.p1 GENE.S_Transcript_87784~~S_Transcript_87784.p1 ORF type:complete len:320 (+),score=39.54,IQ|PF00612.23|1.3e-05,IQ|PF00612.23|0.00056,IQ|PF00612.23|8e+02 S_Transcript_87784:354-1313(+)
MGKATRWLKGIFGIKPNNTTKDQKDPNFSTSGDRKRASFGHSGRDSGTGVKEKRENMTKLSPSNSRAWMKSYYSESEKEQSKHAIAVAAAADAAVAAAQAAVAVVRLTSHGRGSVFSAPGGAAGREKLAAVKIQTTFRGYLARKALRALKGLVKIQALVRGYLVRKQATATLHGMQALIRAQATVRSRRAQAHFTNHDFSDFRARRSMEIFDDTRSEHAASIHSRRLSASFESRTINPIIEDTPKIVEVDPGRPRSSRAWRTTNGPGPRSECREHDPFYPPRISIPNCHHWHPHHHHHHHQAAGMRTRKEETGTPLANI*

Click here to download the sequence:
Link to NCBI Protein BLAST