Transcript Information: S_Transcript_87786.p1


Annotated TAIR IDAT3G23290.2
Annotated Gene NameProtein of unknown function (DUF640)
Annotated Gene Symbol(s)LSH4
Annotation TypeOrtholog
Chromosome Positionchr3:8326958-8328010 | Forward length=195
E-Value3.5E-101
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.9301367316952
Replicate 24.7914138938037
Replicate 31.4903221077657
Condition 2: 8 Hour
Replicate 11.4001518895087
Replicate 20.56494567272037
Replicate 33.9832644514359
Condition 3: 24 Hour
Replicate 10.88262155517552
Replicate 21.2591006431304
Replicate 31.5286087518252


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_87786.p1 GENE.S_Transcript_87786~~S_Transcript_87786.p1 ORF type:complete len:198 (+),score=13.17,DUF640|PF04852.8|9.7e-64 S_Transcript_87786:189-782(+)
ATGAACTCACTAACAATCCCCCAAGAAATTACTACTACAAATCCCACAAACTCCATAACAACACAACCTTCACCATCATCATCATCAAGCAGCAGGTATGAGAACCAGAAAAGAAGAGACTGGAACACCTTTGGCCAATATCTAAAGAACCACAGGCCCCCGCTCAGCTTAAACAGGTGCAGTGGGGCCCACGTCCTGGAATTCCTTCGTTACTTAGACCAGTTTGGCAAAACCAAAGTCCATACCCAAATCTGCCCCTTCTACGGGCACCCGAACCCGCCTGCCCCCTGCCCGTGCCCGTTGAGGCAAGCTTGGGGCTCCCTTGATGCTTTGATCGGACGCCTCAGAGCTGCCTTTGAGGAGAATGGTGGCAAGCCCGAACAGAACCCGTTTGGGGCCCGGGCTGTGAGGCTCTACCTTAGGGAAGTCAGGGATTTGCAGTCTAAGGCTAGGGGGATTAGCTATGAGAAGAAGAAGCGTAAGCGGGCCCCGCCTCCGCTCCCGCCGCTACCTCAACCGCCCCCTTCGCAGTTCGATCCCTCCGGTCGTCATCCGCTCGGCCCGCCGCCACTCCCGCCACCAGGTGCTAGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_87786.p1 GENE.S_Transcript_87786~~S_Transcript_87786.p1 ORF type:complete len:198 (+),score=13.17,DUF640|PF04852.8|9.7e-64 S_Transcript_87786:189-782(+)
MNSLTIPQEITTTNPTNSITTQPSPSSSSSSRYENQKRRDWNTFGQYLKNHRPPLSLNRCSGAHVLEFLRYLDQFGKTKVHTQICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEQNPFGARAVRLYLREVRDLQSKARGISYEKKKRKRAPPPLPPLPQPPPSQFDPSGRHPLGPPPLPPPGAS*

Click here to download the sequence:
Link to NCBI Protein BLAST