Transcript Information: S_Transcript_87903.p1


Annotated TAIR IDAT1G79350.1
Annotated Gene NameRING/FYVE/PHD zinc finger superfamily protein
Annotated Gene Symbol(s)EMB1135
Annotation TypeOrtholog
Chromosome Positionchr1:29844829-29853215 | Reverse length=1295
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.87724284934
Replicate 211.646801481652
Replicate 311.424975558867
Condition 2: 8 Hour
Replicate 114.968612853741
Replicate 212.834474365339
Replicate 312.636872185468
Condition 3: 24 Hour
Replicate 112.49578264616
Replicate 210.888442364323
Replicate 311.424473069428


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_87903.p1 GENE.S_Transcript_87903~~S_Transcript_87903.p1 ORF type:5prime_partial len:1201 (+),score=295.59,AAA_34|PF13872.2|1.4e-133,Helicase_C_4|PF13871.2|1.3e-107,ResIII|PF04851.11|1.8e-06,PHD|PF00628.25|1.3e+03,PHD|PF00628.25|2e-06 S_Transcript_87903:2-3604(+)
CCACTACCTCCTCCACCTTCTTTTCCTCCTTTTCCTAACCCTAACCCTAACCCTAACCCGGCCCAGGGTTCTGGCCCACCCGTTCAGGCCCACGGTATCGATCCCAGCAAGATGCAACTTCCTTGTGCTAACTGTAAGGCTTTGCTTAATGTCCCTCATGGTCTTACCCGGTTTAAGTGCCCCCAGTGTGAGATCGACCTTGCTGTTGATTTGTCCAAAATTAAGCACCTCCTTCCTTCCCCTCCTGTTGAAGAAGTCAACGAGGTTGCCATTGAAGTTGAACAGGAGGAAGATGAAGGTGGCACAGTGGGGGAGACATTTACTGATTATCGCCCTCCTAAATTATCTATCGGTCCTCCTCATCCAGATCCAATTGTTGAGACATCATCATTGTCAGCAGTGCAACCACCTGAACCTACATATGAGCTGGCAATAAAGGATGAGATTGAGGAGACAAAGGCATTGTCTTGCTTGCAGCTTGAAACGTTGGTCTATGCTTCTCAGAGACACTTGCAGCATCTTCAGGATGGCTGCAGAGCTGGATTTTTTATTGGAGATGGTGCTGGGGTTGGAAAAGGCCGAACTATTGCTGGGTTAATATGGGAGAATTGGCAGCATGGAAGAAAGAAAGCATTGTGGATATCTATTGGTTCAGACTTAAAGTTTGATGCACGAAGAGATCTGGATGATGTAGGTGCAACTTGTATTGAAGTGCATGCCCTGAATAAGCTTCCTTATGGGAAGCTTGATTCAAAGTCTGTTGGGATCAGGGAAGGTGTTGTGTTTTTGACGTACAGTAGTCTTATTGCATCTTCTGAAAGGGGCCGTTCTCGCTTAAACCAGCTTGTGCAGTGGTTCGGGTCAAAGTTTGATGGTCTTGTTATATTCGATGAGTGTCACAAGGCTAAAAATTTGGTACCTGAAGCTGGAGGGCAGCCTACACGAACAGGCAAAGCTGTTCTTGAACTTCAGGAAAAACTTAAGGAAGCTCGTGTTGTTTATTGCTCAGCCACTGGTGCATCAGAACCACGTAATATGGGCTACATGGTTCGCCTTGGGCTGTGGGGTGATGGTACATCTTTCAGCAATTTCAAGGAGTTTCTAGGTGCACTGGAAAAAGGTGGTGTTGGAGCCTTAGAGCTTGTTGCTATGGACATGAAGGCAAGGGGGATGTTTGTTTGTCGAACACTTAGCTATAAGGGCGCTGAGTTTGAAGTTGTTGAGGCCCCATTGGATGATAAGATGACGGAAATGTATAAGAAAGCAGCTGAATTTTGGGCTGAATTGCGTGTAGAATTATTAAGAGCGGGTGCCCATCTTAAAGAAGATAAAACTACTTCCAGTCAGTTGTGGAGGTTATATTGGGCGAGCCATCAGCGATTTTTTAGACACCTGTGCATGTCAGCAAAGGTGCCTACTGTTGTAAAACTTGCCAAGCAAGCGCTTATGGATAATAAGTGCGTGGTCATTGGTCTTCAGAGTACTGGAGAGGCACGAACTGAGGAAGCTGTAACAAAATATGGCCTTGAACTAGATGACTTTGTTTCTGGGCCTCGCGAACTGTTGCTCAAGTTTGTTGAAGAAAATTATCCTATGCCTGAAGAGCCTGAACCGCTTCCAGAAGATGAAGGTGTGAAGGAACTCTCCCGAAAAAGACACTCTGAAAATCCTGATGTATCATTGAAAGGGCGAGTCAGGAAAGTTGCCAAATGGAAGGAGGAAACTGATGACGATGATGAAAGTTATGAACAGTCTGAATCTGAATGTGATGATGAATCTACTGAATCTGATGACGAATTTCAGATTTGTGACATTTGCAATGGTGAAGAGGATAGGAAAAAGCTGCTTAGATGTGCCTGTTGTGGCCAGCTGGTACATCCTTCATGCTTAGACCCACCTAGAACAGATGTTTGTGAGGATTGGACATGCGATTCATGCAAGCAAAAGACAGAAGAATATCTGCAAGAAAGACGTATCTACATAGAAGAAATCACTAAGAGATTTGAAGCAGCTGTTAAGCGTCGAAAGGAAATTGTGGAAATAATTCGGTCTTTTGATCTACCTAACAATCCATTAGATGACATTATTGATCAGCTCGGAGGGCCTGATAATGTTGCAGAAATAACAGGGAGACGGGGTATGCTTGTTCGAGCTATAGGTGGCAAAGGCGTCACGTATCAGGCGAGGAACACGAAAGATGTCACTATGGAGATGGTTAATATGCACGAGAAGAAACTTTTCATGGATGGTGTAAAGTTGGTCGCTATCATTTCTGAAGCCGGGTCAGCTGGTGTTTCTCTGCAAGCTGACAGAAGGGCTATAAATCAGAGGAGGAGGGTTCACTTGACATTAGAACTCCCATGGAGTGCTGACAGAGCTATCCAGCAATTTGGGAGGACCCATCGGTCTAATCAAGCCTCTGCTCCGGAATACAGACTCCTATTTACGAATCTTGGTGGTGAACGGCGGTTTGCATCTATTGTGGCAAAGAGACTTGAATCTCTTGGTGCACTAACGCAGGGTGACCGCAGAGCAGGACCGTCTCTAAGTGCTTATAATTATGATAGTGCCTATGGGAAAAAGGCCTTGATGGTGATGTATAGGGGGATCATGGAGCAGGATTCCTTGCCAGTCGTGCCCCCTGGATGTTCACGTGAAAATCCAGACTCAATTCAGAATTTCATTTCCAAGGCAAAAGCCGCTTTGGTTTCTGTTGGAATTGTGAGGGATACAAATTTAGGTATAGGAAAAGATTCTGGAAAGCTATCTGGCCGTATAATTGACTCTGACATGCATGATGTTGGTCGTTTTCTTAATCGGTTGTTGGGATTACCTCCTGAAATTCAAAACAGGCTTTTTGAATTATTTATTAGTATCCTGGAAGTGATTATCCAGAAAGCGCGAACTGAAGGGAATCTTGATTCTGGAATTGTTGACATAAAAGCTAATATTATTGAACTTCAAGGAAAACCCAAGACTGTGCATGTGGATCATATGTCTGGTGCACCAACTGTGCTGTTCACATTCACTCTAGACCGTGGGATCACATGGGAGTTTGCTTCTTCCTTGCTTAATGAGAAACAAAAGGGGGGTCTTGGTTCCACGAATGATGGATTTTATGAGTCCAGGAGGGAATGGCTTGGAAGACGTCATTTCCTTTTGGCTTTTGAAGGCGCCATGTGTGGCATGTTTAAGATAGTTCGTCCTGCTGTTGGAGAGGCGATAAGGGAAATGCCTTTGAGTGAACTTAGAACCAAGTATAGAAAGATATCATCTTTGGAGAAGGCTCACAGTGGGTGGGAAGATGAATACGAGGTTTCATCTCGACAGTGTATGCATGGGCCCAATTGCAAGGTTGGTGCCTATTGTACTGTCGGCAGGAGACTTCAGGAAGTAAATGTTCTGGGTGGCTTGATCCTTCCAATTTGGAAAGCGATTGAGAAGGCCCTATCAAAACAGGCGCGCCACAGCCATAGGCGAATACGTGTTGTGCGTATTGAGACAACCACAGATAGCCAACGAATTGTGGGGCTTTTGATTCCAAGTGCTGCTGTTGAAGATGTGATGCAAGATTTGTCTTGGGTTCAAGATATTGATGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_87903.p1 GENE.S_Transcript_87903~~S_Transcript_87903.p1 ORF type:5prime_partial len:1201 (+),score=295.59,AAA_34|PF13872.2|1.4e-133,Helicase_C_4|PF13871.2|1.3e-107,ResIII|PF04851.11|1.8e-06,PHD|PF00628.25|1.3e+03,PHD|PF00628.25|2e-06 S_Transcript_87903:2-3604(+)
PLPPPPSFPPFPNPNPNPNPAQGSGPPVQAHGIDPSKMQLPCANCKALLNVPHGLTRFKCPQCEIDLAVDLSKIKHLLPSPPVEEVNEVAIEVEQEEDEGGTVGETFTDYRPPKLSIGPPHPDPIVETSSLSAVQPPEPTYELAIKDEIEETKALSCLQLETLVYASQRHLQHLQDGCRAGFFIGDGAGVGKGRTIAGLIWENWQHGRKKALWISIGSDLKFDARRDLDDVGATCIEVHALNKLPYGKLDSKSVGIREGVVFLTYSSLIASSERGRSRLNQLVQWFGSKFDGLVIFDECHKAKNLVPEAGGQPTRTGKAVLELQEKLKEARVVYCSATGASEPRNMGYMVRLGLWGDGTSFSNFKEFLGALEKGGVGALELVAMDMKARGMFVCRTLSYKGAEFEVVEAPLDDKMTEMYKKAAEFWAELRVELLRAGAHLKEDKTTSSQLWRLYWASHQRFFRHLCMSAKVPTVVKLAKQALMDNKCVVIGLQSTGEARTEEAVTKYGLELDDFVSGPRELLLKFVEENYPMPEEPEPLPEDEGVKELSRKRHSENPDVSLKGRVRKVAKWKEETDDDDESYEQSESECDDESTESDDEFQICDICNGEEDRKKLLRCACCGQLVHPSCLDPPRTDVCEDWTCDSCKQKTEEYLQERRIYIEEITKRFEAAVKRRKEIVEIIRSFDLPNNPLDDIIDQLGGPDNVAEITGRRGMLVRAIGGKGVTYQARNTKDVTMEMVNMHEKKLFMDGVKLVAIISEAGSAGVSLQADRRAINQRRRVHLTLELPWSADRAIQQFGRTHRSNQASAPEYRLLFTNLGGERRFASIVAKRLESLGALTQGDRRAGPSLSAYNYDSAYGKKALMVMYRGIMEQDSLPVVPPGCSRENPDSIQNFISKAKAALVSVGIVRDTNLGIGKDSGKLSGRIIDSDMHDVGRFLNRLLGLPPEIQNRLFELFISILEVIIQKARTEGNLDSGIVDIKANIIELQGKPKTVHVDHMSGAPTVLFTFTLDRGITWEFASSLLNEKQKGGLGSTNDGFYESRREWLGRRHFLLAFEGAMCGMFKIVRPAVGEAIREMPLSELRTKYRKISSLEKAHSGWEDEYEVSSRQCMHGPNCKVGAYCTVGRRLQEVNVLGGLILPIWKAIEKALSKQARHSHRRIRVVRIETTTDSQRIVGLLIPSAAVEDVMQDLSWVQDIDD*

Click here to download the sequence:
Link to NCBI Protein BLAST