Transcript Information: S_Transcript_87918.p1


Annotated TAIR IDAT5G09860.1
Annotated Gene Namenuclear matrix protein-related
Annotated Gene Symbol(s)AtTHO1, THO1, AtHPR1, HPR1
Annotation TypeOrtholog
Chromosome Positionchr5:3066815-3070733 | Forward length=599
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.889012250609
Replicate 217.381704273108
Replicate 318.412402636095
Condition 2: 8 Hour
Replicate 123.991064106775
Replicate 222.555827658145
Replicate 322.963618719182
Condition 3: 24 Hour
Replicate 118.539407699254
Replicate 214.835850341096
Replicate 316.63493389219


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_87918.p1 GENE.S_Transcript_87918~~S_Transcript_87918.p1 ORF type:complete len:608 (+),score=143.01,efThoc1|PF11957.4|3e-99 S_Transcript_87918:192-2015(+)
ATGGAAATATTTAGGAGCGCGTTATTGAATCCAGGGCCACCTGAGAGTTTTGCCCTACAAACTGTGCAGGAAGCCATTAAACCTCAGAGGCAAACAAAATTAGTTCTGGATGAGAATCAGTTATTGGAGAACATATTACGGACATTACTTCAAGAATTGGTGGCATGTGCAGTACAGTCTGGGGAACCGATTATGCAATATGGTCGGTCCATCGCTGATGGCGATATTGCACAGGGTCAAATTCCTCGTCTTCTAGACATTGTATTGTACCTGTGTGAGAAAGAACATGTGGAGGGTGGCATGATATTTCAGCTGTTGGAGGATTTGACTGAAATGTCTACCATGAAAAATTGCAAAGACATTTTTGCGTATATAGAGAGCAAACAAGACATACTTGGAAAGCAAGAGCTGTTTGCACGAGGGAAACTTGTAATGTTGAGGACATGCAATCAGCTGCTTCGCCGTCTGTCAAAGGCTAATGATGTGGTGTTTTGTGGACGGATTCTTATGTTTCTGGCACATTTCTTCCCATTGTCTGAGCGCTCAGCTGTCAATATTAAGGGAGTTTTCAATACGTCCAATGAAACAAAGTTTGAGAAGGATGCACCTGATGGCATTTCTATCGATTTCAACTTCTACAAGACATTCTGGAGTTTACAGGAGTATTTTTATAACCCTCCTTCCTTGACTATGAATCTGACAAAGTGGCACAGATTTACATCCAGCTTAATGGTTGTACTAAACACCTTTGAGGCTCAACCCTTGAGTGATGAAGAAGGAAATGCTACTAATATTGAAGAAGAGGGGGCAGCTTTCAATATAAAATATCTTACCAGTAGTAAACTGATGGGTCTGGAGTTGAAAGATCCTAGTTTTCGGCGTCATGTTCTTGTGCAGTGCTTGATGTTGTTCAATTATCTGAAGGCCCCTGGTAAGAGTGACAAAGATTCGCCAAGTGAAGCAATGAAAGAAGAAATCAGAACCTGTGAAGAGCGTGTAAAGAAGCTTCTTGAAGTGACTCCTCCAAAGGGAAAAGAGTTTCTGAATAGTGTTGATCATATCTTAGAACGTGAAAAAAATTGGGTATGGTGGAAACGTGATGGCTGCCCACCATTTGAAAAACAACCAGTGGAGATGAAGGTTGATGGTGTAAAGAAACGTCGAGCAAAGTGGAGAATGGGGAACAAGGAACTTTCTCAGCTGTGGAAATGGGCGGATCAAAATCCGAATGCTCTCACTGATCCGGATCGTGTTCGGACTCCTTTAATCATGGATTACTGGAAACCGCTGGCTGAAGATATGGATGAATCTGCTGGTATAGAGGCCGAATATCATCACAAGAACAACAAGGTCTATTGTTGGAAAGGTCTTCGCTTTTCAGCTCGACAGGACTTGGAAGGATTTTCTAGATTTACAGAATTTGGTATTGAAGGGGTTGTGCCTCTAGAACTTTTGCCTATTGAGGCGAGGTCAAAATATCAGGCAAAACCAAATGAGAAGTCTAAACGTGCCAAGAAGGATGATGCTAAGGGTTCTGCACCTCCATTAGAAGATAATCAGAGCACAATTCCTGCAAGTGAGATGGATGGTGAAGGTGGCAGAACTGATCTTGAAGCTCCATCAGCACGGGTGGACATGGATTCCACACCTGTAACAGGCAACAATTCTCAAGGTGGCACCCCGACACCAGAGGATCATCAAAAGCAGAGTTCGGGAACCCCTGAGGCACCAGAAGCAGGACAACTAGAAACAGATGCAGAGGCTGAGCCGGGGATGATTGACGGGGAGACAGATGCTGATGTTGATTTAGAAGCAGTAGGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_87918.p1 GENE.S_Transcript_87918~~S_Transcript_87918.p1 ORF type:complete len:608 (+),score=143.01,efThoc1|PF11957.4|3e-99 S_Transcript_87918:192-2015(+)
MEIFRSALLNPGPPESFALQTVQEAIKPQRQTKLVLDENQLLENILRTLLQELVACAVQSGEPIMQYGRSIADGDIAQGQIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTMKNCKDIFAYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFNTSNETKFEKDAPDGISIDFNFYKTFWSLQEYFYNPPSLTMNLTKWHRFTSSLMVVLNTFEAQPLSDEEGNATNIEEEGAAFNIKYLTSSKLMGLELKDPSFRRHVLVQCLMLFNYLKAPGKSDKDSPSEAMKEEIRTCEERVKKLLEVTPPKGKEFLNSVDHILEREKNWVWWKRDGCPPFEKQPVEMKVDGVKKRRAKWRMGNKELSQLWKWADQNPNALTDPDRVRTPLIMDYWKPLAEDMDESAGIEAEYHHKNNKVYCWKGLRFSARQDLEGFSRFTEFGIEGVVPLELLPIEARSKYQAKPNEKSKRAKKDDAKGSAPPLEDNQSTIPASEMDGEGGRTDLEAPSARVDMDSTPVTGNNSQGGTPTPEDHQKQSSGTPEAPEAGQLETDAEAEPGMIDGETDADVDLEAVG*

Click here to download the sequence:
Link to NCBI Protein BLAST