Transcript Information: S_Transcript_88026.p1


Annotated TAIR IDAT5G30490.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Craniofacial development protein 1/Bucentaur (InterPro:IPR011421); Has 333 Blast hits to 324 proteins in 149 species: Archae - 0; Bacteria - 18; Metazoa - 117; Fungi - 96; Plants - 49; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:11612199-11614271 | Forward length=236
E-Value5.9E-66
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.738212709356
Replicate 216.267816350952
Replicate 314.298956773678
Condition 2: 8 Hour
Replicate 115.724101088266
Replicate 217.416059384091
Replicate 314.975057494639
Condition 3: 24 Hour
Replicate 111.890253039184
Replicate 211.833952247143
Replicate 310.61560729709


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_88026.p1 GENE.S_Transcript_88026~~S_Transcript_88026.p1 ORF type:5prime_partial len:316 (+),score=85.32,BCNT|PF07572.8|9.8e-25 S_Transcript_88026:2-949(+)
CGTTCCTCCATAAGAAGGGACAATTACCAGTATTCCCCAGATCTGTGTTGGGTTCGTATTGGAGCTGGGGCAAAAAAAAATCGAAAACCCTGCTCTCTTCTTTACGATATAATTGTATTTTGGGGGGTGGTATACGCAGGGAGCTTCGAAGTGGTGGCAACTTGCTCTCATCTATTTAAGGTGACGCTGGAAATGGATGGGCTTCAGACGGAGTCCAAAAATGAACCAGCTACAGTCCCTTCTTCGCAAGCTAAGCCTGAAGAATCTGAAATCAAAGCTCGGGTAGATGCTGTGTGGGAGCAGCTGAATAAAGGAGTATCTACAAAGACACTGAACTCGATTGTAAACAGTTGTAGCTCAAATGGGAAAAGAAGTGTGCAGAAGGATGACACTTCTCATAATTGGATGACAGTCTTGGGCTTGGGATCAAAGAAAACAGTAGCAAATGGGACTCCTGTAGAATGGAAAAACACTACCTCACAAAATGGAACCAGTGACGAGGCCAAGAAGCTTGCAGCTGCTGCTATTGCTGCAGCCAAAGATGCTGCTGCTGCTTCGGCATCTGCTGCATTAGCCAGGGGAAAGGTTCAGGTCTCTGAGATTCGAGACTTTGCAGGTGAAGAGATAGAAGTGAAGAAGCTAGTTGACGCTGATGAAAAGGCTAAGTCCCCAGCAGGGCCATCATCTGCAGTTGATGCTGTGCTTGATCAGATTAGGAAGAAACCGAAGCTTAGTCTTCTTGACAAGACTAAGAAGGACTGGGGAGAATTTAAAGGAGAAAACAAGGGCTTGGAGGAGGAATTGGATGCCTACAAAAAGAGTTCAAATCAGTATCTAGACAAAGTCTCCTTCCTACAAAGGGCAGATTACAGAGAATTTGAGCGAGAGAGAGATGCAAGACTTGCCATACAGGCAAAGAGGAGGCCGGACATGTGTGAGGATCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_88026.p1 GENE.S_Transcript_88026~~S_Transcript_88026.p1 ORF type:5prime_partial len:316 (+),score=85.32,BCNT|PF07572.8|9.8e-25 S_Transcript_88026:2-949(+)
RSSIRRDNYQYSPDLCWVRIGAGAKKNRKPCSLLYDIIVFWGVVYAGSFEVVATCSHLFKVTLEMDGLQTESKNEPATVPSSQAKPEESEIKARVDAVWEQLNKGVSTKTLNSIVNSCSSNGKRSVQKDDTSHNWMTVLGLGSKKTVANGTPVEWKNTTSQNGTSDEAKKLAAAAIAAAKDAAAASASAALARGKVQVSEIRDFAGEEIEVKKLVDADEKAKSPAGPSSAVDAVLDQIRKKPKLSLLDKTKKDWGEFKGENKGLEEELDAYKKSSNQYLDKVSFLQRADYREFERERDARLAIQAKRRPDMCEDP*

Click here to download the sequence:
Link to NCBI Protein BLAST