Transcript Information: S_Transcript_88079.p1


Annotated TAIR IDAT5G56610.1
Annotated Gene NamePhosphotyrosine protein phosphatases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22916738-22918137 | Forward length=228
E-Value2.3E-90
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.8064840450961
Replicate 210.830823964598
Replicate 39.6572872583217
Condition 2: 8 Hour
Replicate 113.105421685802
Replicate 214.643391836912
Replicate 311.394289447026
Condition 3: 24 Hour
Replicate 19.9294924957246
Replicate 28.8182830497061
Replicate 38.7130698854037


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_88079.p1 GENE.S_Transcript_88079~~S_Transcript_88079.p1 ORF type:complete len:275 (+),score=61.33,DSPc|PF00782.16|1.3e-16 S_Transcript_88079:434-1258(+)
ATGACAATTTCACAAGATGATACTGTTATTGTTGACAAACAAAAGAGTAAAAAGATTGTCAAAATTGATGCAAAGAAGGTGTTAGTTGGAGCAGGAGCTAGGGTCCTCTTTTACCCAACCCTTTTGTACAATGTTCTCAGATTCAAGATTCAATCTGATTTCAGATGGTGGGATGAAGTTGTTCAGTTTCTGCTTCTAGGTGCAGTTCCATTCCCCAAAGATGTTCCAAAGTTAAAGCAACTTGGTGTTGGTGGGGTGATTACTCTTAATGAGCCATTTGAGACATTAGTTCCTCCATCACTATACAAGGCTCATGGAATGGAGCATTTGGTCATCCCAACCAGAGATTACGTGTATGCTCCATCTCTTGTGGATATCAACAGAGCAGTGGATTTCATTCACAATAATGCGTCTTGTGGGAGGGCAACGTATGTTCATTGCAAAGCTGGGAGGGGAAGGAGCACGGCTGTTGCACTATGCTACCTGGTGAAGCACAAGCAAATGACACCTTCTGCTGCTATGGATTTGATTCGGTCAAAAAGACCTCGTGTACTGTTGCATTCTATGCAGGCCAATGCTGTGCAGCAATATTATATGTGTTGTCTGGCTGCATCTGGTTCTTCTACACCAAGCGATGAAGTACTTATAACCAAAGATGATCTTGAAGGATACAATGAGAGTTCTGATCATACTCTCAACAAAGACCTCATCCCAAAAGCAATTAAGGTGCTGCCAGTAGCGAGAAGGCTTTCTTTCCTCGTCAATTCTTTAGCAATTGCTTGTGGATGTGTATCAATTCCTAGCCGGCAGGTGAAAATGAGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_88079.p1 GENE.S_Transcript_88079~~S_Transcript_88079.p1 ORF type:complete len:275 (+),score=61.33,DSPc|PF00782.16|1.3e-16 S_Transcript_88079:434-1258(+)
MTISQDDTVIVDKQKSKKIVKIDAKKVLVGAGARVLFYPTLLYNVLRFKIQSDFRWWDEVVQFLLLGAVPFPKDVPKLKQLGVGGVITLNEPFETLVPPSLYKAHGMEHLVIPTRDYVYAPSLVDINRAVDFIHNNASCGRATYVHCKAGRGRSTAVALCYLVKHKQMTPSAAMDLIRSKRPRVLLHSMQANAVQQYYMCCLAASGSSTPSDEVLITKDDLEGYNESSDHTLNKDLIPKAIKVLPVARRLSFLVNSLAIACGCVSIPSRQVKMR*

Click here to download the sequence:
Link to NCBI Protein BLAST