Transcript Information: S_Transcript_88109.p1


Annotated TAIR IDAT5G63420.1
Annotated Gene NameRNA-metabolising metallo-beta-lactamase family protein
Annotated Gene Symbol(s)emb2746
Annotation TypeOrtholog
Chromosome Positionchr5:25400515-25405807 | Forward length=911
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.696984834359
Replicate 216.061511585324
Replicate 319.462706815086
Condition 2: 8 Hour
Replicate 156.875730608787
Replicate 262.671476663433
Replicate 361.108637603445
Condition 3: 24 Hour
Replicate 114.941308572573
Replicate 217.36876756246
Replicate 314.746071108183


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_88109.p1 GENE.S_Transcript_88109~~S_Transcript_88109.p1 ORF type:complete len:886 (+),score=186.86,Myb_DNA-bind_4|PF13837.2|7.1e-18,Lactamase_B_2|PF12706.3|1.3e-09,Lactamase_B_2|PF12706.3|92,RMMBL|PF07521.8|3.5e-09,Lactamase_B|PF00753.23|7.7e-09 S_Transcript_88109:272-2929(+)
ATGGCTGCTTTTACTGCTCTATCTATTTGCCCATGCACCTTTTCATACCCTCCTAAACACATAAAGCGCTGCATTTCTTTCTCTACTGACCCACTTCATGCCTTAGGCACACAGACATCAAGGGTACCGCGCAAAAGAACAGGGAGACTTGAGGGTGCAAAGAAAAGTATGGAGGATTCTGTGAAACGTAAAATGGAGCAATTCTATGAAGGTTCTACTGGTCCACCTCTACGTATTTTACCAATTGGTGGCCTAGGTGAAATTGGCATGAACTGCATGCTTGTTGGGAATTATGATCGTTATATTCTGATTGACGCTGGCATCATGTTTCCGGACTATGATGAGTTTGGAGTCCAAAAAATCATACCAGATACCAGTTTCATAAAAAGATGGAGCCACAAAATTGAAGCTGTTGTCATTACGCACGGACATGAAGATCACATTGGTGCGTTGCCCTGGGTCATCCCTGCGCTGGACTTGAACACACCAATATTCGCATCGTCTTTCACCATGGAGCTGATAAAGAAGCGTCTGAAAGAATTTGGAATCTTTGTTCCATCTAGACTGAAGGCATTTAAAACACGGAGGAGATTCACAGCTGGCCCATTTGAAATAGAGCCTATCAGGGTTACCCATTCCATACCTGACTGCTGCGGGTTGGTTATGCGCTGTGCTGATGGTACAATTTTTCACACTGGTGACTGGAAGATTGATGAAACGCCTGTGGATGGAAAAGTATTTGATCGTAATGCATTGGAGGAGCTTTCAAAGGAAGGAGTTACATTAATGATGAGCGACTCAACAAACATACTATCACCTGGGAGGACAATTAGTGAAAGTGTTGTGGCAGATGCTCTACTGAGGCAGATATCGGCAGCTAAAGGAAGGGTGATCACCACTCAATTTGCCTCAAATATACATAGACTTGGGAGTATAAAAGCAGCAGCTGATGCTACGGGTCGGAAATTGGTGTTTGTTGGAATGTCCTTGAGGACATATTTGGATGCTGCTTGGAAGGATGGAAAAGCACCAATTGATCCATCAACTCTGGTGAAGGTGGAAGATATTGATGCCTATGCACCAAAAGATTTGTTGATTGTAACAACAGGCTCTCAAGCAGAACCACGTGCTGCCCTGAATCTTGCATCCTTTGGTAGCAGTCATTCCCTGAAATTAAGCAAGGAAGATGTTATTTTATATTCCGCAAAGGTCATACCTGGCAACGAAAACCGGGTAATGAAAATGTTCAACCGTATAGCAGATATTGGATCGACATTAATCATGGGCAGGAATGAGATGCTACACACTTCTGGTCATGCGCACCGTGAGGAATTGGCGGAAGTTCTGAAGATTGTGAAGCCACAACATTTTTTGCCGATTCATGGTGAGCTTTTGTTCTTAAAGGAGCATGAGCTACTTGGAAAATCAACTGGAGTTCGGCACACAACTGTGATAAAGAATGGAGAAATGCTTGGAGTGTCCCATCTGAGGAACAGGAGGGTTTTATCAAATGGATTTATTTCCCTGGGAAAAGAAAATTTACAGTTGATGTATAATGATGGTGACAAAGCATTTGGGACTGCTGCTGAGCTTTGCATTGATGAAAGAATGAAAATTGCTACAGATGGTATAATAGTCATCAGCATGGAAGTCCTACGTCCTGATGCAGTAGAGGGTTATACAGAGAATTGCTTGAAAGGGAAAATAAGAATAACCACACGTTGCTTATGGCTCGATAAAGGAAAGCTTTTGGATGCACTGCACAAAGCTGCACATGCGGCACTGTCTAGCTGTCCTGTAAATTGTCCGCTTGGACATATGGAGCGAACTGTTGCGGAGGTATTGAGGAAGCTGGTTCGGAAGTACAGTAGCAAAAGGCCAGAAGTAATTGCTATTGCCATCGAAAACCCCGCAGCAGTTCTTTCTGATACAGTGGATAAACGGCTGTCTGGAAAATCTCAAACTGGGTCCAGGATACCAGCACTGAGAAAGGCAATCGAGGGGCATCACAAGAGGAAAAAGTTTAGCCAAATACAAGATGATGAAAACGATGGTCGTTTGTCTCTGTCTAGCAATTTAACAACAGATTCAGAAGGTGCAGATGGTAGTGATTTTGAAAGACTCTTTCTGGAGGATGATGCTGCTGCTTCTGGTTCTCATGTAGAAAAAAACTCCACTGCTGAATCTGAGGATTCAGATTTGTATTATCCATTTCTTGAATCATCATCAGCGCCAATTGGTGAACCAGAAAAAAGGAGTAATGCCTCTGTTATGCTGGAGGAACATACAGAGATGAACAGAGGCGAAGAAGTTAGTGAAGATGACTCTGAATCAGATAGTTCTACTTCAAAGAGTCCAAAGTCAACAAAACGGAACAAATGGAAACCCGAAGAGGTTAAGAAGTTGATTAGATTGCGTGGAGAGCTGCATGGAAGATTCCAGGTTCCAAGAGGACGTATGGCACTATGGGAAGAGATTTCATCAAGCCTATTGGCTGATGGTGTCAATCGGACCCCAGGGCAGTGCAAATCCTTGTGGGCTTCACTGGTCCAAAAATACGAGGAAAGCAAGAGCGAAAAAATGAGCAAGAAAAGTTGGCCATACTTCCAGGAGATGGACACTATCTTATCTGATTTGGGAGAAGTGGTGAACAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_88109.p1 GENE.S_Transcript_88109~~S_Transcript_88109.p1 ORF type:complete len:886 (+),score=186.86,Myb_DNA-bind_4|PF13837.2|7.1e-18,Lactamase_B_2|PF12706.3|1.3e-09,Lactamase_B_2|PF12706.3|92,RMMBL|PF07521.8|3.5e-09,Lactamase_B|PF00753.23|7.7e-09 S_Transcript_88109:272-2929(+)
MAAFTALSICPCTFSYPPKHIKRCISFSTDPLHALGTQTSRVPRKRTGRLEGAKKSMEDSVKRKMEQFYEGSTGPPLRILPIGGLGEIGMNCMLVGNYDRYILIDAGIMFPDYDEFGVQKIIPDTSFIKRWSHKIEAVVITHGHEDHIGALPWVIPALDLNTPIFASSFTMELIKKRLKEFGIFVPSRLKAFKTRRRFTAGPFEIEPIRVTHSIPDCCGLVMRCADGTIFHTGDWKIDETPVDGKVFDRNALEELSKEGVTLMMSDSTNILSPGRTISESVVADALLRQISAAKGRVITTQFASNIHRLGSIKAAADATGRKLVFVGMSLRTYLDAAWKDGKAPIDPSTLVKVEDIDAYAPKDLLIVTTGSQAEPRAALNLASFGSSHSLKLSKEDVILYSAKVIPGNENRVMKMFNRIADIGSTLIMGRNEMLHTSGHAHREELAEVLKIVKPQHFLPIHGELLFLKEHELLGKSTGVRHTTVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQLMYNDGDKAFGTAAELCIDERMKIATDGIIVISMEVLRPDAVEGYTENCLKGKIRITTRCLWLDKGKLLDALHKAAHAALSSCPVNCPLGHMERTVAEVLRKLVRKYSSKRPEVIAIAIENPAAVLSDTVDKRLSGKSQTGSRIPALRKAIEGHHKRKKFSQIQDDENDGRLSLSSNLTTDSEGADGSDFERLFLEDDAAASGSHVEKNSTAESEDSDLYYPFLESSSAPIGEPEKRSNASVMLEEHTEMNRGEEVSEDDSESDSSTSKSPKSTKRNKWKPEEVKKLIRLRGELHGRFQVPRGRMALWEEISSSLLADGVNRTPGQCKSLWASLVQKYEESKSEKMSKKSWPYFQEMDTILSDLGEVVNK*

Click here to download the sequence:
Link to NCBI Protein BLAST