Transcript Information: S_Transcript_88224.p1


Annotated TAIR IDAT5G10780.2
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP017207, transmembrane protein 85 (InterPro:IPR016687), Protein of unknown function DUF1077 (InterPro:IPR009445); Has 395 Blast hits to 395 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 122; Plants - 51; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3408422-3409784 | Forward length=187
E-Value4.5E-102
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 189.34364700382
Replicate 293.221347086422
Replicate 380.256302078086
Condition 2: 8 Hour
Replicate 187.410665805391
Replicate 277.072247786311
Replicate 378.587548038145
Condition 3: 24 Hour
Replicate 188.699829118402
Replicate 279.447866954449
Replicate 382.318100970544


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_88224.p1 GENE.S_Transcript_88224~~S_Transcript_88224.p1 ORF type:complete len:182 (+),score=45.63,DUF1077|PF06417.8|1.2e-38 S_Transcript_88224:176-721(+)
ATGGAGAAGGGGAAAGGAGTAATGGGGACTAATGGTAGAAGATGGGCAGTTGAATTCACTGACAATTCTACTGCTCCTTCTTCTCGTGACTTTCCTGATCCTCCTGGTTTCACTCGGGCTTCTCAAGATCAGGATGATTCATCTCTCAGTCGTCAAAAGAAGGACGCTGAATCTAATTGGAAAGCTCAGAAAGCATGGGAGGTAGCACAAGCTCCTTTCAAGAATTTGATGATGATGGGCTTCATGATGTGGATGGCTGGAAGCACCGTACATTTGTTCAGCATCGGTATAACATTTTCAGCTTTCTGGCAGCCCATCAGTGCTCTTCAAGGTGTTGGAAAAGTTTTTGAGCCTTACAAGGACAGCAAAGTTGATCTTAACGCACCCAAGCTGCTTTACATTGCTCTGAATTTGGTGGGTCTTGGCCTTGGTATCTGGAAGCTAAACACGCTGGGTCTTTTACCAACTCATGCATCAGATTGGGTGTCATCCTTACCACCTGCTCAGGATGTCGAATACTCTGGTGGTGGCTTGCCTCTGTACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_88224.p1 GENE.S_Transcript_88224~~S_Transcript_88224.p1 ORF type:complete len:182 (+),score=45.63,DUF1077|PF06417.8|1.2e-38 S_Transcript_88224:176-721(+)
MEKGKGVMGTNGRRWAVEFTDNSTAPSSRDFPDPPGFTRASQDQDDSSLSRQKKDAESNWKAQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSAFWQPISALQGVGKVFEPYKDSKVDLNAPKLLYIALNLVGLGLGIWKLNTLGLLPTHASDWVSSLPPAQDVEYSGGGLPLY*

Click here to download the sequence:
Link to NCBI Protein BLAST