Transcript Information: S_Transcript_88230.p1


Annotated TAIR IDAT1G32360.1
Annotated Gene NameZinc finger (CCCH-type) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:11673325-11675162 | Forward length=384
E-Value3E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.45726806246015
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.58626502590056
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 12.3271181725375
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_88230.p1 GENE.S_Transcript_88230~~S_Transcript_88230.p1 ORF type:complete len:291 (+),score=66.07,zf-CCCH|PF00642.20|2.3e-07,zf-CCCH|PF00642.20|0.0008,zf-CCCH|PF00642.20|5e-11,Torus|PF16131.1|0.14,Torus|PF16131.1|0.57,Torus|PF16131.1|0.22 S_Transcript_88230:738-1610(+)
ATGGATTTCGGAGCTGAAGCTGGTTACCATGGTGGTGGAGTGGGGCCAGTGGTTCCGGAAATAGGGGTAGGGTTCGACAATTGGGGTGGTGGTGGTCCAAATGATCAGGCAATTTGGGCCACTGAAGATGAGTATAGAAATTGGAATGCCCTTGAAACTTTATCAAATTCCAACTACAATCCAAATTCAGTTCCACTCAGCCGAGCGGGAGGAGGAGGAGCTGAGCCACCCAACAAAAAGACTAGAAGCTCCCACTCCCTGAGTGGAGATTCTGCTGCCAATGCCAACAGCCGCTCCAAAGCCATTGGGAGAATGTTTTACAAGACCAAACTTTGCTGTAAGTTTCGTGCTGGGGTATGCCCTTATGTCACTAACTGTAATTTTGCTCATGGCCTTGAAGAGCTCCGTAAGCCGCCCCCTAACTGGCAAGAGATTGTTGCTGCTCACGAGGAGGAGCGTGGTATCACTGTTGAACAAAGGGAAGAGCATCAGATACCTACCATTAGCACTTCTGATTCTCGAATTGAATCTCAAAGATCCTACAAAGGTAGGCACTGCAAGAAGTTCTACACTGAAGAAGGCTGCCCTTATGGTGATAATTGCACTTTTCTTCATGACGAGCAATCTAGAGCTAGAGAGAGTGTGGCTATAAGTGTCAGCCCCACTGTTGGTGGTGCTGCCTTTGGTGCTACTGGATCTACCCAGAAGCCTTCCAACTGGAAGACCAGGATATGCAACAAGTGGGAGACCACAGGTAGTTGCCCCTTTGGCTCCAAGTGCCATTTTGCTCATGGATTAGCAGGTATTCTTCATCCCCCTCTCCCCCTCTCTCTAATGCATTATTCTTTTTGGACTCTTTTATCATTCTGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_88230.p1 GENE.S_Transcript_88230~~S_Transcript_88230.p1 ORF type:complete len:291 (+),score=66.07,zf-CCCH|PF00642.20|2.3e-07,zf-CCCH|PF00642.20|0.0008,zf-CCCH|PF00642.20|5e-11,Torus|PF16131.1|0.14,Torus|PF16131.1|0.57,Torus|PF16131.1|0.22 S_Transcript_88230:738-1610(+)
MDFGAEAGYHGGGVGPVVPEIGVGFDNWGGGGPNDQAIWATEDEYRNWNALETLSNSNYNPNSVPLSRAGGGGAEPPNKKTRSSHSLSGDSAANANSRSKAIGRMFYKTKLCCKFRAGVCPYVTNCNFAHGLEELRKPPPNWQEIVAAHEEERGITVEQREEHQIPTISTSDSRIESQRSYKGRHCKKFYTEEGCPYGDNCTFLHDEQSRARESVAISVSPTVGGAAFGATGSTQKPSNWKTRICNKWETTGSCPFGSKCHFAHGLAGILHPPLPLSLMHYSFWTLLSFC*

Click here to download the sequence:
Link to NCBI Protein BLAST