Transcript Information: S_Transcript_88231.p1


Annotated TAIR IDAT1G32360.1
Annotated Gene NameZinc finger (CCCH-type) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:11673325-11675162 | Forward length=384
E-Value9E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.156283214654
Replicate 29.5968187761387
Replicate 36.2027139294621
Condition 2: 8 Hour
Replicate 18.6066597692465
Replicate 27.2231977670866
Replicate 38.7939819715618
Condition 3: 24 Hour
Replicate 15.2897924147627
Replicate 28.7403040159905
Replicate 36.3337869358139


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_88231.p1 GENE.S_Transcript_88231~~S_Transcript_88231.p1 ORF type:5prime_partial len:223 (+),score=49.82,zf-CCCH|PF00642.20|0.00056,zf-CCCH|PF00642.20|3.5e-11 S_Transcript_88231:1-669(+)
TTGGTAGTCAGCCTGTTGGGGGCCCTGCTCTTAATGTTGCTATGGCTGGCAGTGTTGGTAGTGATCCCTTGGGTGGGTTTTACAGGATTTTCCTTCACTCTACTCAACAATTCATCTCAAAGATCCTATAAAGGTAGGCACTGCAAGAAGTTCTACACTGAAGAAGGCTGCCCTTATGGTGATAATTGCACTTTTCTTCATGACGAGCAATCTAGAGCTAGAGAGAGTGTGGCTATAAGTGTCAGCCCCACTGTTGGTGGTGCTGCCTTTGGTGCTACTGGATCTACCCAGAAGCCTTCCAACTGGAAGACCAGGATATGCAACAAGTGGGAGACCACAGGTAGTTGCCCCTTTGGCTCCAAGTGCCATTTTGCTCATGGATTAGCAGAACTACACAAATATGGTGGGGGGCTTGTGGAGGGGGAACTTAGAGATTCCTCTGTGACAACAGAAACAAAGCAAGCTGGTGTGGCCACAAAGACACCAGATATGTCAGCAGCTACCACCTTATCAGCCCCTCGTCCGGATTTTCACCATGTGGGACATGGAATTCCTTCACAGAGGCCTTCTGGTGTGACTCAGGTGGTTGGGCAAAGGCTGGTTCAGAAATGGAAAGGACCAGACAAGATAAGTAGGATATATGGTGACTGGATTGATGACATTGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_88231.p1 GENE.S_Transcript_88231~~S_Transcript_88231.p1 ORF type:5prime_partial len:223 (+),score=49.82,zf-CCCH|PF00642.20|0.00056,zf-CCCH|PF00642.20|3.5e-11 S_Transcript_88231:1-669(+)
LVVSLLGALLLMLLWLAVLVVIPWVGFTGFSFTLLNNSSQRSYKGRHCKKFYTEEGCPYGDNCTFLHDEQSRARESVAISVSPTVGGAAFGATGSTQKPSNWKTRICNKWETTGSCPFGSKCHFAHGLAELHKYGGGLVEGELRDSSVTTETKQAGVATKTPDMSAATTLSAPRPDFHHVGHGIPSQRPSGVTQVVGQRLVQKWKGPDKISRIYGDWIDDIE*

Click here to download the sequence:
Link to NCBI Protein BLAST