Transcript Information: S_Transcript_88275.p1


Annotated TAIR IDAT1G05670.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:1698574-1700799 | Reverse length=741
E-Value1E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.3953936896196
Replicate 28.2897369766005
Replicate 38.0123041302531
Condition 2: 8 Hour
Replicate 18.1796017654757
Replicate 28.3620804113264
Replicate 38.7182233844249
Condition 3: 24 Hour
Replicate 17.8231187451639
Replicate 26.8745416718862
Replicate 37.1075819850034


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_88275.p1 GENE.S_Transcript_88275~~S_Transcript_88275.p1 ORF type:complete len:511 (+),score=78.88,PPR_2|PF13041.2|9e+03,PPR_2|PF13041.2|0.0052,PPR_2|PF13041.2|3.1e-14,PPR_2|PF13041.2|0.0014,PPR_2|PF13041.2|3.1e+02,PPR_2|PF13041.2|0.033,PPR_1|PF12854.3|4.7e+03,PPR_1|PF12854.3|0.0073,PPR_1|PF12854.3|1.6e-08,PPR_1|PF12854.3|6.3e-08,PPR_1|PF12854.3|3.1e+03,PPR_1|PF12854.3|1.7e+03,PPR|PF01535.16|1.8e+02,PPR|PF01535.16|4.9e+03,PPR|PF01535.16|0.0012,PPR|PF01535.16|8.1e-08,PPR|PF01535.16|2,PPR|PF01535.16|64,PPR|PF01535.16|0.19,PPR_3|PF13812.2|7.8e+03,PPR_3|PF13812.2|5.1e+03,PPR_3|PF13812.2|2.2,PPR_3|PF13812.2|0.00018,PPR_3|PF13812.2|0.094,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|12 S_Transcript_88275:1250-2782(+)
ATGGGAGTTTTTAGTTTCTGCAAGAAGTCAAGGTTTTCCTTAAACCCGACTTTTCTATATTGCCCTCTTCTCTCTTGTCATTCTAGAACCCTAACCTCCTTATCCCCTGCCCCAACTCATTCTGCCCCAGATCCTACAGATTCTCCCATTGTCTCAACTGGGGACTTTTCTTTTTCTCAAAGCAGAAGTTCCAAATCTTCAAAATATTATCCTTCGGCCACCTTCCCATATGGGTCTCATATGGCTGATAGTTTTAGAAGTTATATTTGTATGCCAACTGTTTGCTTGCGGAGTGACTATGGAAAATTTAGATCTTTTTCAAGTTCTGCTAACACAGTCAGAACTTTGGGCAGTGATGGGAAATTCAAACATGTTGAGTTTCGTTTGAAATCTGCTGAAATTAGCAACATAATTGATATAATTAAAAAAGATGGAAGTGATATGGAATCCAGTTTAGATTTGATTGGTTCAAATTTTTCCAAGTGGTCTGTTATTGATATTTTGTTGGGTTTGAATGCTGGCAAGGTGCCTGCCTTGAGGTTCTTTGAATGGGTTAGAGATGTGCATCCATCACATTCTGGAAATGCTGATGTTTGTAGCTTGATAATTGACAATTGTGGGCTGTTGGGTGATTATACTACTATGCTGAATCTGCTGAAGGATTTCCGAAAGAAACAGATTTGTCTTAACGCCAAAGCTTTTGGTTTTTTGCCCCTATTGAGCACAGCAAAGGAGGAAGCTAAGAAATCTATACAAGGAGTTTTAGTGGTTCTAAAAGAAGTTGGTGGGTCATGTCGTAACTCTGGGATTTATTCGTTGATTGAGTTGCTTTGTTCTCTGAATTCATTTGAGTTAGCATCATATATTATTGAAATAACAGAACAAAGAGCGTCTTATTACAATATTTTGGTAAAACATTTATGTATGAGTGGCCAGTATGAAGAAGCAAGGAATATGATTGAAGAGATGTGGAAAGTTTGCTCTGAACCTGAAGCTACAGCGTACAATTTCTTGATTAGTAATTTATGCAAGGAAGGCAGGCCTGACGAAGCATTCTCTGTTCTGGATGAGATGCTACAAAGAAGATGTTCTCCTAATGTGATTACTTTTGAAATATTGATATATTTCGCTTGTAGATATGGCAGGTCAGCAGATGCTGTCAAGTTCTATAATCAAATGATTTCTCTAAGCATTCAACCACGTCCTACCACGCATTGTGCTTTTGTGAGGGGTTATTTCAATTCCCGACGGTTTGAGGAAGCATATAAACATGTGGTTGAGAGAGCTGAAGAGGATAAACAATCAGGTCAGGTGATCTACAATGCATTGGCTGGCCTTCATCTAAAACGCGGGGATCTTCTTTTTGCTCACAACCTTCTTGTAGAAATGATTAGAAAGGAGATTAAACCTAAAAACTCACTTTATCTGAGAGTTTCACAACGTCTCCGCAAGACTGGCAAGGCACACCTTGCTAGAAACTTGGAGGCTCAGATTTCTAACTTTATGCAGAAATTCAGACAAGATTCTCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_88275.p1 GENE.S_Transcript_88275~~S_Transcript_88275.p1 ORF type:complete len:511 (+),score=78.88,PPR_2|PF13041.2|9e+03,PPR_2|PF13041.2|0.0052,PPR_2|PF13041.2|3.1e-14,PPR_2|PF13041.2|0.0014,PPR_2|PF13041.2|3.1e+02,PPR_2|PF13041.2|0.033,PPR_1|PF12854.3|4.7e+03,PPR_1|PF12854.3|0.0073,PPR_1|PF12854.3|1.6e-08,PPR_1|PF12854.3|6.3e-08,PPR_1|PF12854.3|3.1e+03,PPR_1|PF12854.3|1.7e+03,PPR|PF01535.16|1.8e+02,PPR|PF01535.16|4.9e+03,PPR|PF01535.16|0.0012,PPR|PF01535.16|8.1e-08,PPR|PF01535.16|2,PPR|PF01535.16|64,PPR|PF01535.16|0.19,PPR_3|PF13812.2|7.8e+03,PPR_3|PF13812.2|5.1e+03,PPR_3|PF13812.2|2.2,PPR_3|PF13812.2|0.00018,PPR_3|PF13812.2|0.094,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|12 S_Transcript_88275:1250-2782(+)
MGVFSFCKKSRFSLNPTFLYCPLLSCHSRTLTSLSPAPTHSAPDPTDSPIVSTGDFSFSQSRSSKSSKYYPSATFPYGSHMADSFRSYICMPTVCLRSDYGKFRSFSSSANTVRTLGSDGKFKHVEFRLKSAEISNIIDIIKKDGSDMESSLDLIGSNFSKWSVIDILLGLNAGKVPALRFFEWVRDVHPSHSGNADVCSLIIDNCGLLGDYTTMLNLLKDFRKKQICLNAKAFGFLPLLSTAKEEAKKSIQGVLVVLKEVGGSCRNSGIYSLIELLCSLNSFELASYIIEITEQRASYYNILVKHLCMSGQYEEARNMIEEMWKVCSEPEATAYNFLISNLCKEGRPDEAFSVLDEMLQRRCSPNVITFEILIYFACRYGRSADAVKFYNQMISLSIQPRPTTHCAFVRGYFNSRRFEEAYKHVVERAEEDKQSGQVIYNALAGLHLKRGDLLFAHNLLVEMIRKEIKPKNSLYLRVSQRLRKTGKAHLARNLEAQISNFMQKFRQDSH*

Click here to download the sequence:
Link to NCBI Protein BLAST