Transcript Information: S_Transcript_88312.p1


Annotated TAIR IDAT4G16180.2
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28720.1); Has 5 Blast hits to 5 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:9165365-9170323 | Reverse length=820
E-Value4.6E-67
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.64127713819712
Replicate 21.1961753374556
Replicate 31.5554114769302
Condition 2: 8 Hour
Replicate 12.0554593076755
Replicate 21.0781613802278
Replicate 30.77045232307162
Condition 3: 24 Hour
Replicate 11.4475525204611
Replicate 21.0922318831975
Replicate 32.4310404245895


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_88312.p1 GENE.S_Transcript_88312~~S_Transcript_88312.p1 ORF type:internal len:166 (-),score=41.57 S_Transcript_88312:1-495(-)
TCAAGAGAGAGGACGACTTTTGCGAGTGGTTGGGGGTCGGAATTGGCGGCGCGTGATTGCCACGACTTGGAGACTGGAGAGCCCCTTGATATTGAACATCATATTGTCTACAATGTTTTCCCTGCTGGACAGGCAGAACTAATATCTCTGGAGAAGGTGTTAAAAGAGGCTATGGTTCCTGCTGGAACAGCCAGAGAGACTGAATTTGGGAAGGAAGTGCCAGCATTTGATGTGGAAGCAGCTGCTGTAGAGCCTGTTTTTGAGCAGCTTTATTCCTACATATTTGATGTTGATGGCTCGGGGTATCCTAATGCAGAGATTGACAGGCCGGTGCCAACTGCAATTTTTGTTTTGAACTTTGATAAGGTCAGAGTGGATCCTAGAAACAAGGGAATCAATCTTGAGGATCTTATATATGGTAATATTCCACAACTTACAGATGATGATATGAAAAAACAAGAAGGCGATTATATATATCGCTACCGTTACAATGGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_88312.p1 GENE.S_Transcript_88312~~S_Transcript_88312.p1 ORF type:internal len:166 (-),score=41.57 S_Transcript_88312:1-495(-)
SRERTTFASGWGSELAARDCHDLETGEPLDIEHHIVYNVFPAGQAELISLEKVLKEAMVPAGTARETEFGKEVPAFDVEAAAVEPVFEQLYSYIFDVDGSGYPNAEIDRPVPTAIFVLNFDKVRVDPRNKGINLEDLIYGNIPQLTDDDMKKQEGDYIYRYRYNG

Click here to download the sequence:
Link to NCBI Protein BLAST