Transcript Information: S_Transcript_88314.p1


Annotated TAIR IDAT4G16180.2
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28720.1); Has 5 Blast hits to 5 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:9165365-9170323 | Reverse length=820
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.452865295641
Replicate 217.579587245951
Replicate 316.648430479408
Condition 2: 8 Hour
Replicate 125.264809710692
Replicate 224.13514705468
Replicate 322.680901885103
Condition 3: 24 Hour
Replicate 116.867908803698
Replicate 216.216347938249
Replicate 317.021773810349


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_88314.p1 GENE.S_Transcript_88314~~S_Transcript_88314.p1 ORF type:complete len:812 (+),score=158.42 S_Transcript_88314:168-2603(+)
ATGCCATTGATGATTCCATGTCGTCGAACACAAGCAGCAACATGTATGATAGTGCTGATAATGGCGGTACTGCTTCTTCAACCGGCAGAATCAGTTCACAAAGCCTTCAGAAGAGATCCAGGAAGCCCTCATTGGCATCACAGCGCCTTCCATGACGTCAAAGAGAGTGTCCGCTCCGATGTTCGTCGTATGCTCCACACTCGCGCTGAGGTTCCATTCCAAGTCCCTCTTGAAGTGAACATAGTCCTAGTCGGATTTAATCGTGATGGAGGCTATAGGTACACAATAGACTCCCATAAGCTGCAGGATTTTCTAAAAATCAGTTTCCCCACACACCGACCGTCATGCTTGGAGACTGGAGAGCCCCTTGATATTGAACATCATATTGTCTACAATGTTTTCCCTGCTGGACAGGCAGAACTAATATCTCTGGAGAAGGTGTTAAAAGAGGCTATGGTTCCTGCTGGAACAGCCAGAGAGACTGAATTTGGGAAGGAAGTGGCAGCATTTGACGTGGAAGCAGCTGCTTTAGAGCCTGTTTTTGAGCAGCTTTATTCCTACATATTTGATGTTGATGGCGCGGGGTATCCTAATGCAGAGATTGACAGGCCGGTGCCAACTGCAATTTTTGTTTTGAACTTTGATAAGGTCAGAGTGGATCCTAGAAACAAGGAAATCAATCTTGAGGATCTTATATATGGTAATATTCCACAACTTACAGATGATGATATGAAAAAACAAGAAGGCGATTATATATATCGCTACCGTTACAATGGGGGTGGAGCATCTCAAGTTTGGCTGAGCTCAAGCAGATTTGCTGTTATTGACCTGTCAGCGGGTCCTTGCACATATGGAAAGATTGAAACAGAGGAAGGAAGCATCAGTTCCAAGACACTCCCCCGCATTCGGAACCTTCTAACTGCTGCTGGTGCTGCTTTCTCAAGCCATGATGTATTTCTAGGACAACTTGGGGCACTTATTTCAATGACAATTGAGCATGTTATAGCCCCAGATGTTAGGTTTGAAACTATTGATATGACGAGAAGGTTGCTAATACCGATCATTGTTCTCCAGAACCATAATCGATACAACATTATGGCAAAAGGCCACAATTACAGTATAGATGTTGATGCGATAAAAGCAGAGGTTGTGAAAATGGTCCATCCGGACCAAGAAGTTGTAATTGTTGGGGGCGTGCATCCATTACATCACCATGAGAAGTTGGCAATCGCTGTTTCCAAAGCAATGCGAGGACATTCTGTACATGAAACAAAGAATGATGGACGTTTTCATGTTCAAACAAAGACTTATTTTGATGGTGCTATTCTTAAGGAGGAGATGGAAAGATCGGCTGATGTGCTTGCTGCTGGTATATTGGAGGTTGCTGATCCTGCTCTTTCAAATAAGTATTTCCTTCGCCAGAGCTGGATGGATGAATCGATTGGTTCAAGTGATTCCATACTGAAACATAAGCCTCTTTGGGCGTCTTATAGCAGCAAACGTGGCAAACAGAAGAAAAAGAGAACACTAAAGAAAGAAGGAGACCTTTATCGGACCTATGGAACCAGAGTCATACCAGTTTTTGTGCTTTCATTAGCTGATGTTGATCCGCACCTAATGATGGAAGATGAAAGTCTTGTTTGGGCCAGTAATGATGTTGTCATTGTACTTGAGCATCAAAGTGCAAAAATACCTCTAAGTTATGTTTCTGAAACAGAAAGGAGGCATGCTCTTCCATCTCAAGCTCAGCGCCATATATTGGCAGGTCTTGCATCAGCTGTTGGTGGATTGAGTGCACCATACGAAAGAGCTTCACATATACATGAACGACCACTGTTGAACTGGCTTTGGGGTGTTGGTTGCCATCCCTTTGGGCCATTTTCCAATTCTACTAAAGTCAGTCAATTGCTTCATGACGTTGCACGTAGAAATACAATATATGCTCATGTTGATTCTGCACTTCGAAAGATCAGGGACACCTCAGAGGCTGTGCAAGCTTTCGCTACAGAGTACTTGAGGACTCCTCTCGGTGAACCGGTAAAAGGAAAAAAGAACAAGTCCAGCACTGAACTTTGGTTGGAGAAGTTCTACAAAAAGACCACCCATTTGCCGGAACCATTCCCACATGAATTAGTCGAAAGATTGGAGAAGTACTTGGATAATATTGAGGAACAGCTCGTCGATTTGTCATCCTTGTTGTATGACCACCGATTACAGGAAGCACATTTTAACAGTTCAGAAATTCTGCAGACATCCATTTTCACACAGCAATATGTTGATAATATCTTGGCCAGTGAGCGCGAGAAGATGAAATGCTGCAGTATTGAGTACAAGTATCCCACACAAACATCTCAAACATTCATCTATGGAGGAATCCTTATTGCTGGATTTGTTGTATATTTCCTCGTGATTTTCTTCTCAAATCCTGTTCGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_88314.p1 GENE.S_Transcript_88314~~S_Transcript_88314.p1 ORF type:complete len:812 (+),score=158.42 S_Transcript_88314:168-2603(+)
MPLMIPCRRTQAATCMIVLIMAVLLLQPAESVHKAFRRDPGSPHWHHSAFHDVKESVRSDVRRMLHTRAEVPFQVPLEVNIVLVGFNRDGGYRYTIDSHKLQDFLKISFPTHRPSCLETGEPLDIEHHIVYNVFPAGQAELISLEKVLKEAMVPAGTARETEFGKEVAAFDVEAAALEPVFEQLYSYIFDVDGAGYPNAEIDRPVPTAIFVLNFDKVRVDPRNKEINLEDLIYGNIPQLTDDDMKKQEGDYIYRYRYNGGGASQVWLSSSRFAVIDLSAGPCTYGKIETEEGSISSKTLPRIRNLLTAAGAAFSSHDVFLGQLGALISMTIEHVIAPDVRFETIDMTRRLLIPIIVLQNHNRYNIMAKGHNYSIDVDAIKAEVVKMVHPDQEVVIVGGVHPLHHHEKLAIAVSKAMRGHSVHETKNDGRFHVQTKTYFDGAILKEEMERSADVLAAGILEVADPALSNKYFLRQSWMDESIGSSDSILKHKPLWASYSSKRGKQKKKRTLKKEGDLYRTYGTRVIPVFVLSLADVDPHLMMEDESLVWASNDVVIVLEHQSAKIPLSYVSETERRHALPSQAQRHILAGLASAVGGLSAPYERASHIHERPLLNWLWGVGCHPFGPFSNSTKVSQLLHDVARRNTIYAHVDSALRKIRDTSEAVQAFATEYLRTPLGEPVKGKKNKSSTELWLEKFYKKTTHLPEPFPHELVERLEKYLDNIEEQLVDLSSLLYDHRLQEAHFNSSEILQTSIFTQQYVDNILASEREKMKCCSIEYKYPTQTSQTFIYGGILIAGFVVYFLVIFFSNPVR*

Click here to download the sequence:
Link to NCBI Protein BLAST