Transcript Information: S_Transcript_88376.p1


Annotated TAIR IDAT1G08620.1
Annotated Gene NameTranscription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein
Annotated Gene Symbol(s)PKDM7D
Annotation TypeOrtholog
Chromosome Positionchr1:2737554-2743370 | Forward length=1209
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.4883178208916
Replicate 28.0902928073906
Replicate 38.6540156192121
Condition 2: 8 Hour
Replicate 110.444018063436
Replicate 211.23180587983
Replicate 310.351912864765
Condition 3: 24 Hour
Replicate 110.82387992479
Replicate 29.2588828261042
Replicate 39.9522587029211


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_88376.p1 GENE.S_Transcript_88376~~S_Transcript_88376.p1 ORF type:complete len:1219 (+),score=272.40,JmjC|PF02373.18|4e-45,FYRC|PF05965.10|3.9e-24,JmjN|PF02375.13|3e-16,zf-C5HC2|PF02928.12|3.8e-13,zf-C5HC2|PF02928.12|1.6e+04,FYRN|PF05964.10|8.9e-09 S_Transcript_88376:511-4167(+)
ATGGGTACTGAACTTGTTCGAGCTTGTTTGAAAGAAGAGGACCTTGATTTTCCAGCAGTTCCACCTGGTTTTGAGTCATTCACATCCTTCAAATTGAAGAAGGTGGAAAATACTGAAAATGAACCAAGTTGCTCAGTTTCCTCAAATACTCATCAAGAATCCCCTGTAAAACCTGAGCCTGGACTTGGTAGTCCGGGAAAGATTTCGAGGTCTGTTAGGCGTAGATCTGGGGTTAATTATGGCCGATTCAACCAATGTTCTGATGAGGACTCTGATTCTGAGCAGCTTCAGAACTTTCCAGTAAAGCCTGGCCTGCCGAAAGGGGTCATCCGTGGCTGTGCTGATTGTCGATACTGCCAAAAGGTAATTGCAAGATGGCATCCAGAAGCTGCATGTAGGCCTGACCTTGAGGAGGTGCCTGTATTCTATCCAAGTGAAGAGGAATTTAGAGATACAATAAAATATATAGAACAAATACGCCCAAAGGCTGAATCATATGGAATTTGTCGAATTGTTCCTCCTCCTTCATGGAAACCTCCTTGTCGTTTGAAAGAGAAAGATATATGGGAAACATCTAGATTTGCTACACGGGTGCAGAAGGTGGACAAACTGCAGAATCGTGATGCCTCAAAAAAGATGTCAAAGGCACACAGTCATGCAAAAAAGAAAAGAAGAAAATGCTCAAGAATGTGGTTAGAAGGTGGGGCTCGTAGTGGAAAGATTTTAGAGCAAGGGGAAACAGGATTTGGTTTTGAACCTGGTCCTGAGTTCACTTTAGACGCTTTTCAAAGATATGCGGATGATTTTAGGGCACAGTATTTCAGAACCGAAAATTGTACAGATTCAAATATTGAAAGGGCCAAGTTTACTCAGAAGGGGGAGCCATCAGTTGAGACGATAGAGGGTGAATACTGGAGAATAGTTGAGAAACCCACTGAAGAAATTGAGGTTCTTTATGGGGCTGACCTAGAAACTGGAGTTTTTGGTAGTGGTTTCCCAAAGCCTTCTGGTCAGGGCAGTTTATCTTATGATGATGAATATGTAAAATCAGGATGGAACTTGAACAATTTACCTGGGCTTCCAGGTTCAGTTCTTTCATATGAAAATGCAGATATATCTGGTGTCCAAGTACCTTGGTTGTACGTAGGAATGTGCTTTTCCTCATTTTGTTGGCATGTTGAGGACCATCATTTGTATTCTCTAAATTATATGCACTTTGGTGCACCAAAAATGTGGTATGGTGTTCCTGCAAGTGGGGCTGTTAAGTTGGAGGATGCAATGAAAAAGTATTTGCCAGACCTATTTGATGAGCAGCCTGACCTCCTTCATAAGTTGGTCACACAACTTTCTCCCTCCATCCTCAAATCAGCAGGGGTGCCTGTATATCGCTGTGTACAGAATGCTGGGGAGTTCGTCATGACTTTTCCTCGGGCATATCATGCTGGGTTCAACTGTGGGTTCAATTGTGCTGAGGCCGTGAATGTTGCTCCTATTGATTGGTTTCCTCATGGACAGAATGCTGTGGAGCTCTACCGTGAGCAAGGGCGGAAAACAACGATTTCCCATGACAAGTTGTTGCTTGGGGCAGCTAGAGATGCTGTAAAAGCTAACTGGGAACTTAATTTGCTGAGGAAAAATACTACTGACAACTTGAGATGGAAGGATTTCTGTGGAAGAGATGGAATCTTAGCAAAATCTCTTAGGGCACGTGTTGAGACAGAGAATGTGAGGAGGGAATTCCTTTGCAAATATTCAAAGGCACTGAAGATGGAAAGCAGCTTTGACTCCGCCACTGAGAGGGAATGTAGTATCTGTTTCTTCGACTTACACTTATCTGCTGCAGGTTGTCACTGTACACCAGATAGGTTTGCCTGTTTAAATCATGCAAAACAGTTGTGCCCATGTGATTGGGATAGAAAATTTTTCCTGTTCCGTTATGACGTTGCAGAGTTGAATCTACTGGTTGATGCATTGGAAGGTAAATTAAGTGCAATTTATAGATGGGCGAGGCTTGATCTTGGACTTGCCTTAAGTTCTTGCATATCCAAAGACAATCTCCAGGTTGCGGGCCTTATTGGTGGACTTTCAGAACATCCAGGAGAAAGTGTTGCAACTAGGTCAAACTCACTAACTTTAGTACATTCAAAAGGCAAAGATAGCATCGCAAAAATCCCAAATGATCTGGGTGTGGGCAAGAATTCTTCACTGCAAATGGTCAAGTTCCCTGAAGCTGTACTTGCCCTAGAAGCAACTAGAGTCCCACCAATTAAATTATCTCGTAATAACAAGCGAAAAAATGACAAGTCACAATTCAACAAAGATGGACTTGAACTTACTGTTTTGTGTGATGCAAGTGATCCATCACAACAGCCCATTCAAAGAGACTTATTATGCAACCAGAGGTCCACTTTGGTAGGATCTCAGATGAAGTCATCTTCATCTGGACAAGATGATGTGATATGTCTCAGTGATGATGAAGATGAGCAGTCAAATAAACCGCTATCTGATTCAACTAAAGAAACCCTCTCTCAGAACTGTCGAGATGTTCCCGAGGTGGTGGTGTCTGATCATAAGTTGAATCTGTGTGATCTAGCTAATGCAGCATTGGCTGCTGAAGCCAACTTAAACCTGATATCTGATGGCCAGAAAGATGACTGTATGTCTTGTTCAACATCTCCAAAGGACGAGAATGATGTAAAATGTGAAACAGCTGCCCTGTCTGATGAGCAGAATCTTTCTTGCCATCAAGGTTCTATGGGCTCTAGTATTGAAAAAAGGGATCCCGATGCCTCCACCCCGGACAGTTCTGTTCAAAATGCAATGTGTATGCCCAGTGTAGGGCATAGTATTAAGGTTAGGGATGAAAGCCTTCTACATAGAAATGATACAAAACTATTGGATGATGGAAGAGCGTTTCCAGGTAGCCCATCATGCAGTCAGAGTAGCGTGGACAAACATCATCGCCAGAAAGGTCCACGTATAGCAAAAGTTGTGCGGAGAATCAATTGCAATGTTGAGCCTCTAGAATTTGGGGTTGTGGTACCTGGTGATCTTTGGAGCAACAGTCGGGCCATATTCCCCAAAGGTTTCAAAAGTCGTGTCAGGTACATAAACATTTCAGATCCAACAAACATGTGCAACTATATTTCAGAAATTCTGGGAGGATCTAATGGACCTCTTTTTATGGTGTTTTTAGAGCATTGCCCAAATGAAGTTTTTGTTCATGTGTCGCCAACCAAATCCTGGGAAATGGTTCGTGAACGAGTCAATCAAGAGATTGCAAAGCAACATAAACTGGGAAGAATGAAACTCCCCCCTCTACAGCCTCCTGGCAGCTTGGATGGACTCGAAATGTTTGGTTTTACTTCCCCAGCTATCGTTCAGGCTATTGAAGCATTGGACAAGAACCGTGTGTGCAAAGAGTACTGGAGCTCTCGGCCACTTGCTCAGTTCTCACAGTGCTTTCAATCAAGAGGAAACAATCGAAATCCAGGTTGTAAGTCAGAAGAAGCAAATGTTGGAGCTGACATGATACTTAAGAGTCTACTAAAGAAGGCAAACCCTGAGGAGTTACAATCACTGTTGCATATAATGAAAAATAACCACAGCCTCGTGGCTCGTCTCCTTAATGAGGAGCTCCAAGATCGATCAAGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_88376.p1 GENE.S_Transcript_88376~~S_Transcript_88376.p1 ORF type:complete len:1219 (+),score=272.40,JmjC|PF02373.18|4e-45,FYRC|PF05965.10|3.9e-24,JmjN|PF02375.13|3e-16,zf-C5HC2|PF02928.12|3.8e-13,zf-C5HC2|PF02928.12|1.6e+04,FYRN|PF05964.10|8.9e-09 S_Transcript_88376:511-4167(+)
MGTELVRACLKEEDLDFPAVPPGFESFTSFKLKKVENTENEPSCSVSSNTHQESPVKPEPGLGSPGKISRSVRRRSGVNYGRFNQCSDEDSDSEQLQNFPVKPGLPKGVIRGCADCRYCQKVIARWHPEAACRPDLEEVPVFYPSEEEFRDTIKYIEQIRPKAESYGICRIVPPPSWKPPCRLKEKDIWETSRFATRVQKVDKLQNRDASKKMSKAHSHAKKKRRKCSRMWLEGGARSGKILEQGETGFGFEPGPEFTLDAFQRYADDFRAQYFRTENCTDSNIERAKFTQKGEPSVETIEGEYWRIVEKPTEEIEVLYGADLETGVFGSGFPKPSGQGSLSYDDEYVKSGWNLNNLPGLPGSVLSYENADISGVQVPWLYVGMCFSSFCWHVEDHHLYSLNYMHFGAPKMWYGVPASGAVKLEDAMKKYLPDLFDEQPDLLHKLVTQLSPSILKSAGVPVYRCVQNAGEFVMTFPRAYHAGFNCGFNCAEAVNVAPIDWFPHGQNAVELYREQGRKTTISHDKLLLGAARDAVKANWELNLLRKNTTDNLRWKDFCGRDGILAKSLRARVETENVRREFLCKYSKALKMESSFDSATERECSICFFDLHLSAAGCHCTPDRFACLNHAKQLCPCDWDRKFFLFRYDVAELNLLVDALEGKLSAIYRWARLDLGLALSSCISKDNLQVAGLIGGLSEHPGESVATRSNSLTLVHSKGKDSIAKIPNDLGVGKNSSLQMVKFPEAVLALEATRVPPIKLSRNNKRKNDKSQFNKDGLELTVLCDASDPSQQPIQRDLLCNQRSTLVGSQMKSSSSGQDDVICLSDDEDEQSNKPLSDSTKETLSQNCRDVPEVVVSDHKLNLCDLANAALAAEANLNLISDGQKDDCMSCSTSPKDENDVKCETAALSDEQNLSCHQGSMGSSIEKRDPDASTPDSSVQNAMCMPSVGHSIKVRDESLLHRNDTKLLDDGRAFPGSPSCSQSSVDKHHRQKGPRIAKVVRRINCNVEPLEFGVVVPGDLWSNSRAIFPKGFKSRVRYINISDPTNMCNYISEILGGSNGPLFMVFLEHCPNEVFVHVSPTKSWEMVRERVNQEIAKQHKLGRMKLPPLQPPGSLDGLEMFGFTSPAIVQAIEALDKNRVCKEYWSSRPLAQFSQCFQSRGNNRNPGCKSEEANVGADMILKSLLKKANPEELQSLLHIMKNNHSLVARLLNEELQDRSS*

Click here to download the sequence:
Link to NCBI Protein BLAST