Transcript Information: S_Transcript_88400.p1


Annotated TAIR IDAT1G30070.2
Annotated Gene NameSGS domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:10546794-10548072 | Reverse length=229
E-Value1.4E-99
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1122.87534354081
Replicate 2120.64966902173
Replicate 3126.02536323794
Condition 2: 8 Hour
Replicate 179.826123214133
Replicate 270.944961452106
Replicate 367.692218745549
Condition 3: 24 Hour
Replicate 1108.14201331605
Replicate 2103.51849071359
Replicate 397.025341990852


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_88400.p1 GENE.S_Transcript_88400~~S_Transcript_88400.p1 ORF type:complete len:222 (+),score=60.14,CS|PF04969.12|4.9e-15,Siah-Interact_N|PF09032.7|3.7e-06,Siah-Interact_N|PF09032.7|7e+03 S_Transcript_88400:159-824(+)
ATGGCGGATGAAATATCACTCGATTTGGAGGAGCTTCGTCACCTTCAGAGCATCGCCAAGCGCCCTCGTGTTGTCTCTCTCGTCACCTCCCAGATTCAGAACTTAGAAAAGTTGTTGAAAGACAATGCTTCAACTGCTCCTGTACATCCTACCGCTGCTCCCGTGGCAGTGGCAAGCAAGGTGCCTTCCACTCCAGCTCTCAGCTATTCTACTATAAGCTCCTTTAGCTGGGATCAAGACAATGATAAAGTTAAGATATATCTCTCTCTTGAGGGGGTGCAAGAAGAAAAGATGGAGAAAAATATAAAGCCAATGTCTGTTGAGTTGAAGTTCCATGATGTCAAGGGGAAGAATTATCAGTTTACCATACCAAAATTGAACAAGGAAATTGTTCCAGATAACTGCAAGGTGCTGATTAAGCCTACCAGAGTTGTCATTACTTTGCCTAAAGCTTCAAAAGGGAACTGGTTAGATCTGCATTACAAAGAGGACAAGCTAAAGCCTAACCTGGACAAGGAAAAGGATCCAATGGCGGGTATCATGGATCTGATGAAGAATATGTACGAGGAAGGGGATGAAGAAATGAAGAGAACTATTGCAAAAGCTTGGACAGAAGCGAGATCTGGGAAGACAGCTGACCCTCTGAATGGGTATCGCCAGAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_88400.p1 GENE.S_Transcript_88400~~S_Transcript_88400.p1 ORF type:complete len:222 (+),score=60.14,CS|PF04969.12|4.9e-15,Siah-Interact_N|PF09032.7|3.7e-06,Siah-Interact_N|PF09032.7|7e+03 S_Transcript_88400:159-824(+)
MADEISLDLEELRHLQSIAKRPRVVSLVTSQIQNLEKLLKDNASTAPVHPTAAPVAVASKVPSTPALSYSTISSFSWDQDNDKVKIYLSLEGVQEEKMEKNIKPMSVELKFHDVKGKNYQFTIPKLNKEIVPDNCKVLIKPTRVVITLPKASKGNWLDLHYKEDKLKPNLDKEKDPMAGIMDLMKNMYEEGDEEMKRTIAKAWTEARSGKTADPLNGYRQS*

Click here to download the sequence:
Link to NCBI Protein BLAST